Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4148 |
Symbol | |
ID | 3712630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4686582 |
End bp | 4687220 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_349876 |
Protein GI | 77460369 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.190862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAAG AACCTCGTAA GGTCCGTGAG TTTCGTCGCC GCGAGCAAGA AATTCTCGAT ACCGCGCTCA AGCTGTTCCT CGAACAAGGT GAAGACAGTG TCACCGTCGA GATGATTGCT GATGCCGTGG GTATCGGCAA AGGCACGATC TACAAGCATT TCAAGTCCAA GGCCGAGATC TATCTGCGCC TGATGCTCGA TTACGAGCGC GACTTGAACG AGCTGTTGCA CTCGGCCGAT GTCGACAAGG ACAAGGAAGC GCTGTCCCGT GCCTACTTTG AATTCCGCAT GCGCGACCCG CAGCGCTATC GGCTGTTCGA TCGCCTGGAA GAGAAGGTGG TCAAGGGCAA TCAGGTGCCC GAGATGGTCG AGGAGCTGCA CAAGATCCGT GCCTCGAACT TTGAACGCCT GACCCTGCTC ATCAAGGGCC GCATCAGCGA AGGCAAGCTC GAAGACGTGC CGCCGTACTT CCATTACTGC GCATCCTGGG CGCTGGTGCA TGGCGCAGTG GCGCTGTATC ACTCGCCGTT CTGGAGCAAT GTGCTGGAAG ATCAGGAAGG TTTCTTCCAG TTCCTGATGG ATATCGGCGT GCGCATGGGC AACAAGCGCA AGCGCGACCC TGAAACGCCA AGCAGCTGA
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Protein sequence | MHKEPRKVRE FRRREQEILD TALKLFLEQG EDSVTVEMIA DAVGIGKGTI YKHFKSKAEI YLRLMLDYER DLNELLHSAD VDKDKEALSR AYFEFRMRDP QRYRLFDRLE EKVVKGNQVP EMVEELHKIR ASNFERLTLL IKGRISEGKL EDVPPYFHYC ASWALVHGAV ALYHSPFWSN VLEDQEGFFQ FLMDIGVRMG NKRKRDPETP SS
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