Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4040 |
Symbol | |
ID | 3713891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4565842 |
End bp | 4566636 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_349768 |
Protein GI | 77460261 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.128419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.923094 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCC CGAAATCCCA AGGCACGGCG CTGGTCACCG GCGCTTCTTC CGGCATCGGT GCGGTGTATG CCGAGCGATT GGCGGCACGT GGTTTTGACC TGTTGCTGGT GGCTCGCGAT CAGGAGCGTC TGGAGTCCGC GGCCAGTAAG CTGCGAGACG CACATGGCGT TCAGGTCGAA GTGCTGAAGG CCGACCTGAC GCAAAAGGGT GAAGTGCTCA AGCTTGAACA ACGTCTGCGC AGCGATTCCA GTATCAGCCT GCTGGTCAAC AATGCGGGCG TAGCGGTCAA TGGCTTGTTG GCTAATGCCG ACCCCGAGAC CCTGGAGCAA CTGATCCAGT TGAACGTCAC CACGCTGACC CGACTGGCAG CCGCAGCCGC CTCGGCGTTC ACCCGCGCCG GGCGCGGCAC GATCATCAAT ATCGCGTCCG TGGTCGCACT GTTCCCCGAA CGCTTCAACG CCACCTACAG CGCCAGCAAG GCTTACGTGT TGAGTCTGAC TCAATCGCTC AATACCGAAC TCGAAGGCAC CGGGGTCAAG GTGCAAGCGG TATTGCCCGG TGTGACCCGC ACTGAAATCT GGGAGCGTTC CGGATTCGAT GCCAGCGGTA TCCCTGCGGA GATGGTCATG GAGGCGGGCG AGATGGTCGA TGCCGCGCTG TCCGGTCTGG ATCAGGGCGA ACTGGTCACG ATTCCTTCGC TGCCCGATGC GGGCGAGTGG CAAGCCTTTG TCGCCGCCCG CCATGTAATG GCGCCCAACC TGTCCCACAG TTCGGCGGCC AGCCGCTACA AGTAA
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Protein sequence | MNSPKSQGTA LVTGASSGIG AVYAERLAAR GFDLLLVARD QERLESAASK LRDAHGVQVE VLKADLTQKG EVLKLEQRLR SDSSISLLVN NAGVAVNGLL ANADPETLEQ LIQLNVTTLT RLAAAAASAF TRAGRGTIIN IASVVALFPE RFNATYSASK AYVLSLTQSL NTELEGTGVK VQAVLPGVTR TEIWERSGFD ASGIPAEMVM EAGEMVDAAL SGLDQGELVT IPSLPDAGEW QAFVAARHVM APNLSHSSAA SRYK
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