Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4015 |
Symbol | |
ID | 3713924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4539417 |
End bp | 4540100 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_349743 |
Protein GI | 77460236 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000527031 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.545183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCAA GCATTCTCAC CGCGAAGAAC CTTAGCAAAG TGGTTCCCAG CGCGGAAGGT GAACTGACCA TCCTGCACGA ACTCAGCCTG GAACTGAACA AGGGCGACAG CCTGGCCATC GTCGGCGCGT CCGGTTCTGG CAAATCCACC CTGCTCGGCC TGCTCGCCGG CCTTGATCTG CCAAGCAGCG GCGAAGTGAC GCTCGCCGGA CAAGCCCTGA GCCATCTCGA CGAAGACCAG CGCGCACGCA TTCGCGCCGA ACACGTGGGT TTCGTCTTTC AATCTTTCCA GCTGCTCGAC AGCCTCAACG CGCTGGAAAA CGTCATGCTG CCGCTGGAAC TCGACGGCCG CAAAGACGCG CGAAGCCGCG CCACCGAGTT ACTGCAACGG GTCGGACTCG GCCAGCGCCT GACGCACTCG CCACGTCAGC TCTCCGGCGG TGAACAGCAG CGTGTGGCGA TTGCCCGGGC GTTCGCCGCC GAGCCCGATG TGCTGTTCGC CGACGAACCC ACCGGCAACC TCGACAGCCA CACCGGCGAG CGCATCAGTG ACTTGCTGTT CGAATTGAAC AAGGAACGCG GCACCACCCT GGTGCTGGTG ACCCACGACG AACGCCTGGC CCATCGTTGC CGGCGCCTGA TCCGTCTTGA AGCCGGCCTG TTGGTCGCCC CTCTGGAGCC TTGA
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Protein sequence | MGASILTAKN LSKVVPSAEG ELTILHELSL ELNKGDSLAI VGASGSGKST LLGLLAGLDL PSSGEVTLAG QALSHLDEDQ RARIRAEHVG FVFQSFQLLD SLNALENVML PLELDGRKDA RSRATELLQR VGLGQRLTHS PRQLSGGEQQ RVAIARAFAA EPDVLFADEP TGNLDSHTGE RISDLLFELN KERGTTLVLV THDERLAHRC RRLIRLEAGL LVAPLEP
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