Gene Pfl01_4015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4015 
Symbol 
ID3713924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4539417 
End bp4540100 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_349743 
Protein GI77460236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000527031 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.545183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAA GCATTCTCAC CGCGAAGAAC CTTAGCAAAG TGGTTCCCAG CGCGGAAGGT 
GAACTGACCA TCCTGCACGA ACTCAGCCTG GAACTGAACA AGGGCGACAG CCTGGCCATC
GTCGGCGCGT CCGGTTCTGG CAAATCCACC CTGCTCGGCC TGCTCGCCGG CCTTGATCTG
CCAAGCAGCG GCGAAGTGAC GCTCGCCGGA CAAGCCCTGA GCCATCTCGA CGAAGACCAG
CGCGCACGCA TTCGCGCCGA ACACGTGGGT TTCGTCTTTC AATCTTTCCA GCTGCTCGAC
AGCCTCAACG CGCTGGAAAA CGTCATGCTG CCGCTGGAAC TCGACGGCCG CAAAGACGCG
CGAAGCCGCG CCACCGAGTT ACTGCAACGG GTCGGACTCG GCCAGCGCCT GACGCACTCG
CCACGTCAGC TCTCCGGCGG TGAACAGCAG CGTGTGGCGA TTGCCCGGGC GTTCGCCGCC
GAGCCCGATG TGCTGTTCGC CGACGAACCC ACCGGCAACC TCGACAGCCA CACCGGCGAG
CGCATCAGTG ACTTGCTGTT CGAATTGAAC AAGGAACGCG GCACCACCCT GGTGCTGGTG
ACCCACGACG AACGCCTGGC CCATCGTTGC CGGCGCCTGA TCCGTCTTGA AGCCGGCCTG
TTGGTCGCCC CTCTGGAGCC TTGA
 
Protein sequence
MGASILTAKN LSKVVPSAEG ELTILHELSL ELNKGDSLAI VGASGSGKST LLGLLAGLDL 
PSSGEVTLAG QALSHLDEDQ RARIRAEHVG FVFQSFQLLD SLNALENVML PLELDGRKDA
RSRATELLQR VGLGQRLTHS PRQLSGGEQQ RVAIARAFAA EPDVLFADEP TGNLDSHTGE
RISDLLFELN KERGTTLVLV THDERLAHRC RRLIRLEAGL LVAPLEP