Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3986 |
Symbol | |
ID | 3714012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4514950 |
End bp | 4515717 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | extradiol ring-cleavage dioxygenase III subunit B |
Protein accession | YP_349714 |
Protein GI | 77460207 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCCA GCCTGTTTAT CTCCCACGGC TCGCCCATGC TGGCGCTGGA GCCCGGCGCC AGTGGCCCGG CACTGGCGCG GCTGGCGGCC GAACTGCCAC GCCCGAAAGC CATCATCATC GTTTCCGCCC ATTGGGAAAG CCATGAACTG CTGGTCAGCA GCCATCCGCA ACCGGAAACC TGGCACGACT TCGGCGGTTT CCCTCGCGCG CTGTTTGAAG TGCAATATCC GGCCCCGGGC AATCCGCAAC TGGCCCGCGA GGTTGCCGAC CTGTTGACTG CCAACAACCT GCCGGCGCGC CTCGACCCGC AACGACCGTT CGATCACGGC GTGTGGGTGC CGCTGTCGCT GATGTACCCG CAGGCCGATA TCCCGGTGGT TCAGGTTTCC CTGCCCAGCC GTGGCGGCCC GGCGTTGCAG AACCGCGTCG GCCAGGCGCT GGCCAGACTG CGCGAACAGG GCATTCTGTT GATCGGCTCC GGCAGCATCA CCCACAACCT GCGAGAACTG GACTGGCACG CTGGCCCGGA AAGCGTCGAG CCGTGGGCCC GGGATTTCCG CGACTGGATT GTCGACAAAC TGGCTGCCAA CGACGAAGCC GCATTGCACG ATTACCGCCA GCAGGCACCG AACGCCGTGC GCAGCCATCC AAGTGATGAA CATCTGCTGC CGCTTTACTT CGCCCGAGGT GCTGGTGGCG ACTTCAGCGT TGCCCATCAA GGTTTCACCA TGGGTGCGCT GGGCATGGAC ATCTACCGCT TCGACTGA
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Protein sequence | MFPSLFISHG SPMLALEPGA SGPALARLAA ELPRPKAIII VSAHWESHEL LVSSHPQPET WHDFGGFPRA LFEVQYPAPG NPQLAREVAD LLTANNLPAR LDPQRPFDHG VWVPLSLMYP QADIPVVQVS LPSRGGPALQ NRVGQALARL REQGILLIGS GSITHNLREL DWHAGPESVE PWARDFRDWI VDKLAANDEA ALHDYRQQAP NAVRSHPSDE HLLPLYFARG AGGDFSVAHQ GFTMGALGMD IYRFD
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