Gene Pfl01_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3986 
Symbol 
ID3714012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4514950 
End bp4515717 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID 
Productextradiol ring-cleavage dioxygenase III subunit B 
Protein accessionYP_349714 
Protein GI77460207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCCA GCCTGTTTAT CTCCCACGGC TCGCCCATGC TGGCGCTGGA GCCCGGCGCC 
AGTGGCCCGG CACTGGCGCG GCTGGCGGCC GAACTGCCAC GCCCGAAAGC CATCATCATC
GTTTCCGCCC ATTGGGAAAG CCATGAACTG CTGGTCAGCA GCCATCCGCA ACCGGAAACC
TGGCACGACT TCGGCGGTTT CCCTCGCGCG CTGTTTGAAG TGCAATATCC GGCCCCGGGC
AATCCGCAAC TGGCCCGCGA GGTTGCCGAC CTGTTGACTG CCAACAACCT GCCGGCGCGC
CTCGACCCGC AACGACCGTT CGATCACGGC GTGTGGGTGC CGCTGTCGCT GATGTACCCG
CAGGCCGATA TCCCGGTGGT TCAGGTTTCC CTGCCCAGCC GTGGCGGCCC GGCGTTGCAG
AACCGCGTCG GCCAGGCGCT GGCCAGACTG CGCGAACAGG GCATTCTGTT GATCGGCTCC
GGCAGCATCA CCCACAACCT GCGAGAACTG GACTGGCACG CTGGCCCGGA AAGCGTCGAG
CCGTGGGCCC GGGATTTCCG CGACTGGATT GTCGACAAAC TGGCTGCCAA CGACGAAGCC
GCATTGCACG ATTACCGCCA GCAGGCACCG AACGCCGTGC GCAGCCATCC AAGTGATGAA
CATCTGCTGC CGCTTTACTT CGCCCGAGGT GCTGGTGGCG ACTTCAGCGT TGCCCATCAA
GGTTTCACCA TGGGTGCGCT GGGCATGGAC ATCTACCGCT TCGACTGA
 
Protein sequence
MFPSLFISHG SPMLALEPGA SGPALARLAA ELPRPKAIII VSAHWESHEL LVSSHPQPET 
WHDFGGFPRA LFEVQYPAPG NPQLAREVAD LLTANNLPAR LDPQRPFDHG VWVPLSLMYP
QADIPVVQVS LPSRGGPALQ NRVGQALARL REQGILLIGS GSITHNLREL DWHAGPESVE
PWARDFRDWI VDKLAANDEA ALHDYRQQAP NAVRSHPSDE HLLPLYFARG AGGDFSVAHQ
GFTMGALGMD IYRFD