Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3983 |
Symbol | |
ID | 3714009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4511731 |
End bp | 4512942 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | aminotransferase AlaT |
Protein accession | YP_349711 |
Protein GI | 77460204 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCA GCAAATCGAA CAAGCTCGCC AACGTCTGCT ACGACATTCG CGGCCCGGTG CTCAAGCACG CCAAACGCCT GGAAGAGGAA GGCCATCGCA TCCTCAAGCT GAACATCGGC AACCCGGCAC CCTTTGGTTT CGAAGCGCCA GACGAAATTC TCCAGGATGT GATCCGCAAC CTGCCGACCG CCCAGGGCTA CAGCGATTCC AAAGGCCTGT TCAGCGCGCG CAAGGCGGTG ATGCAGTACT ACCAGCAGAA GCAGGTCGAA GGTGTCGGCA TCGAAGACAT CTATCTGGGC AACGGCGTGT CCGAGCTGAT CGTGATGTCG CTGCAGGCAC TGCTCAACAA CGGTGACGAA GTGCTGGTGC CGGCGCCAGA CTACCCGCTG TGGACCGCAG CCGTGAGCCT GGCCGGCGGT AACGCTGTGC ATTACCTGTG CGACGAGGGC GCCGACTGGT TCCCGGACCT GGCCGACATC AAGGCCAAGA TCACCCCGAA CACCAAGGCG ATGGTGATCA TCAACCCGAA CAACCCGACC GGCGCGGTGT ATTCGAAGGA AGTGCTGTTG GGCATGCTCG AACTGGCTCG CCAGCACAAT CTGGTGGTGT TCTCCGACGA AATCTACGAC AAGATTCTTT ACGACGACGC CGTGCACATC TGCACCGCTT CGCTGGCCCC GGACCTGCTG TGCCTGACCT TCAACGGCCT GTCCAAGTCG TATCGCGTGG CGGGTTTCCG TTCCGGCTGG ATCGCCATTT CCGGGCCGAA ACACAACGCT CACAGCTACA TCGAAGGCAT CGACATGCTG GCCAACATGC GCCTGTGCGC CAACGTGCCG AGTCAGCATG CGATCCAGAC CGCCCTGGGT GGCTATCAGA GCATCAACGA TCTGGTACTG CCGCAAGGTC GCCTGCTGGA ACAGCGCAAC CGCACCTGGG AGCTGCTCAA CGACATTCCC GGCGTTAGCT GCGTGAAGCC GATGGGCGCA CTGTACGCGT TCCCGAAGAT CGACCCGAAA GTCTGCCCGA TCCACAACGA CGAGAAATTC GTGCTCGACC TGCTGCTCTC CGAGAAGCTG CTGGTGGTGC AGGGCACGGC GTTCAACTGG CCGTGGCCTG ACCACTTCCG CGTGGTCACC CTGCCGCGGG TCGATGACCT GGACATGGCC ATCGGTCGCA TCGGCAACTT CCTCAAGTCC TACCGCCAGT AA
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Protein sequence | MQFSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN LPTAQGYSDS KGLFSARKAV MQYYQQKQVE GVGIEDIYLG NGVSELIVMS LQALLNNGDE VLVPAPDYPL WTAAVSLAGG NAVHYLCDEG ADWFPDLADI KAKITPNTKA MVIINPNNPT GAVYSKEVLL GMLELARQHN LVVFSDEIYD KILYDDAVHI CTASLAPDLL CLTFNGLSKS YRVAGFRSGW IAISGPKHNA HSYIEGIDML ANMRLCANVP SQHAIQTALG GYQSINDLVL PQGRLLEQRN RTWELLNDIP GVSCVKPMGA LYAFPKIDPK VCPIHNDEKF VLDLLLSEKL LVVQGTAFNW PWPDHFRVVT LPRVDDLDMA IGRIGNFLKS YRQ
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