Gene Pfl01_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3923 
Symbol 
ID3712560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4439213 
End bp4440412 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349651 
Protein GI77460144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.810818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA AATCCCGCTC GAAACTGTGG TTCCTGGTAC ACAGCTGGCT GGCGTTGCCA 
ATCTGGTTTT TTGTCCTGAT TGTCTGCGTC ACCGGCACCC TGGCGGTGGT CAGCCAGGAA
ATCGTCTGGC TGGTGAATCC GCAAATGCGC GCCACCCAAC CATCGGACGA TGCCCCGCTG
CTGGGTTATG ACCAGATCAT CAGCGCGATC AAGACTGCCG AACCACAGTT GCTGGTCGAA
CGCATCAGTC GTCCCGACGA ATCGCATTTC GCGCTGGAGG TGAACGTCAG TCAACCTGAC
GGGCGCTCGG TAACGGTCTA CGTCAACCCT TACACCGGTG TGATCCAGGG CACCGCGCCC
GACTTCAATT TCCGGGCCTT CACCCGGGCC TTGCATGGCT GGTGGCTGGT ACCGTTCACC
AACGGTTACA GCTGGGGCTG GTATCTGGTG TCCTTCCTGG CGCTGCCGAT GCTGGCTTCG
CTGGTGACCG GACTGGTGGT CTACAAACGT TTCTGGAAGG GCTTTTTCAG CCCGACCCTG
CGCCTGCGTC ACGGTGCGCG GATATTCTGG GGCGATTTCC ACCGTCTCAG CGGCATCTGG
TCGATCTGGT TTATCGCGGT GATCTCCGTC ACCGCCGTGT GGTTCCTGAT CGAAGCCATT
CTTTCGGACA ACCACATCTC CATCTCCAGC GAGCCGGTCA TCGCAGCCAT GTCCCGTGAA
GGCGTGCCGC TGTCCGCCGA TGGTTCGCCA CCGCCACGGG TCAGCCTGGA TCACGCCATC
GAAATTGCCC AGCAACGGAT TCCCGGGTTC GAAGCCAGCA CCATCAATCT GCCCGGCAAT
GCCTACAGCC ACCTCGATAT CCGGGGACGC GGCTGGTATC CGCTGATGTT CCAGTCAGCC
ACGCTCAACC CTTACAGCGG TGAAGTGGCA GCCTCGCGCC TGCTCTCCGA CCGGACCTCC
CTGGAGTTCG TCACCGAATC CATGCGTCCG CTGCACACCG GCGACTTCGG TGGACTGTGG
ATCAAGCTGA TCTGGTTCTT CTTCGGACTG GTGCTGAGCA TGATGGTCCT CAGCGGGCTG
TTGATCTGGA CCAAGCGCAC CGCGCTGGCG ACCGCCAACG CCCTCAAGCG CGAGCACAAG
AAACAGCGCG GTCAGGCACA ACCGGCCCTG CACCGTGAAC CGTCGGAGGT CCATCTGTGA
 
Protein sequence
MSKKSRSKLW FLVHSWLALP IWFFVLIVCV TGTLAVVSQE IVWLVNPQMR ATQPSDDAPL 
LGYDQIISAI KTAEPQLLVE RISRPDESHF ALEVNVSQPD GRSVTVYVNP YTGVIQGTAP
DFNFRAFTRA LHGWWLVPFT NGYSWGWYLV SFLALPMLAS LVTGLVVYKR FWKGFFSPTL
RLRHGARIFW GDFHRLSGIW SIWFIAVISV TAVWFLIEAI LSDNHISISS EPVIAAMSRE
GVPLSADGSP PPRVSLDHAI EIAQQRIPGF EASTINLPGN AYSHLDIRGR GWYPLMFQSA
TLNPYSGEVA ASRLLSDRTS LEFVTESMRP LHTGDFGGLW IKLIWFFFGL VLSMMVLSGL
LIWTKRTALA TANALKREHK KQRGQAQPAL HREPSEVHL