Gene Pfl01_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3916 
Symbol 
ID3712278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4432949 
End bp4434094 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID 
Productluciferase-like 
Protein accessionYP_349644 
Protein GI77460137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTTT TCTGGTTCCT GCCGACTCAC GGCGACGGTC ACTATCTGGG CACCACCCAA 
GGCGCACGCC CGGTCACCCT CAATTACCTG AAACAGGTGG CGCAAGCTGC GGACAGCCTC
GGCTACCACG GCGTGCTGAT TCCCACCGGG CGGTCCTGCG AGGATTCGTG GGTGATCGCA
TCGGCACTGG TGCCGCTGAC CGAACGCCTG CGTTATCTGG TGGCGATCCG TCCGGGGATC
ATCTCGCCAA CCGTTTCGGC GCGCATGGCC GCGACCCTGG ATCGACTGTC CAACGGCCGC
CTGCTGATCA ACGTTGTGAC CGGCGGTGAC CCGGACGAAA ACCGTGGCGA CGGCAGTTTC
CTCAGCCACA GCGAACGCTA CGAAGTCACC GACGAATTCC TCAAGATCTG GCGCCGCGTG
TTGCAAGGCG AAGCAGTGGA TTTCGAAGGC AAACACCTGA AGGTACAAAA CGCCAAAGCC
CTGTATCCGC CGGTGCAGAA ACCCTACCCG CCGCTGTATT TCGGCGGCTC CTCCGACGCG
GCTCACGATC TGGCCGCCGA GCAGGTCGAC GTGTACCTGA CGTGGGGCGA ACCACCGGCC
GCCGTCGCCG AGAAACTCGC CGACGTACGC GAACGCGCCG CCCGTCACGG GCGCAAAGTG
AAGTTCGGCA TCCGCCTGCA CGTGATCGTG CGCGAGACCG CCGAAGAAGC CTGGAAAGCC
GCCGACAAAC TGATCGAACA CATCAGCGAC GAAACCATCG AGGCCGCGCA GAAATCCTTT
TCGCGCTTCG ACTCCGAAGG CCAGCGACGC ATGGCCGCCC TGCATGACGG GCGCCGCGAC
AACCTGGAAA TCGCCCCCAA CCTGTGGGCC GGCGTCGGTC TGGTGCGCGG CGGTTCCGGC
ACTGCATTGG TCGGCGATCC GCAGCAAGTG GCGGCGCGAA TCAAGGAATA CGCGGATCTG
GGCATCGAGA GCTTCATCTT CTCGGGTTAT CCGCATCTCG AAGAAGCCTA CCGCTTTGCC
GAACTGGTCT TCCCGCTGTT GCCCGAACCG TACGCGAGCC TGGCCGGACG CGGCGTCACC
AACCTCACCG GGCCGTTCGG CGAAATGATC GCCAACGATG TACTGCCCGC CAAAGCCAAC
GCCTGA
 
Protein sequence
MDVFWFLPTH GDGHYLGTTQ GARPVTLNYL KQVAQAADSL GYHGVLIPTG RSCEDSWVIA 
SALVPLTERL RYLVAIRPGI ISPTVSARMA ATLDRLSNGR LLINVVTGGD PDENRGDGSF
LSHSERYEVT DEFLKIWRRV LQGEAVDFEG KHLKVQNAKA LYPPVQKPYP PLYFGGSSDA
AHDLAAEQVD VYLTWGEPPA AVAEKLADVR ERAARHGRKV KFGIRLHVIV RETAEEAWKA
ADKLIEHISD ETIEAAQKSF SRFDSEGQRR MAALHDGRRD NLEIAPNLWA GVGLVRGGSG
TALVGDPQQV AARIKEYADL GIESFIFSGY PHLEEAYRFA ELVFPLLPEP YASLAGRGVT
NLTGPFGEMI ANDVLPAKAN A