Gene Pfl01_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3910 
Symbol 
ID3712272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4426861 
End bp4427769 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_349638 
Protein GI77460131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.268348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC TCAACGCAAT GGCCATCTTC GTCCGGGTGG TCGAACGCGG CAGTTTCTCC 
GCCGTTGCCC GGGAACTGCA CACCACCCAG CCGACCATCA GCAAAGTGCT GCGCGCCCTT
GAGAATGAAT TGGGCGGCAA GCTGATTGCC CGCAGTACAC GCAAGCTGTC ACTGACCGAT
GAAGGTCAGC GGTACTACAA CGAATGTCGA AATATCCTCG CCGCCGTGGA CGCTGCCGAG
CACAGTTTCC AGTCCGGCAG GGAAACCGTC GCCGGACCTT TGCGGATCGG CTCCTCCGTC
AGTTTCGGCC GCTTGCATAT CGCTTCGCGG CTGGCGGAGT TTCTGCAGCG CTTTCCGCAG
GTGCAGGTCG ACCTGCAACT GAGCGATCAG AATCTGGATC TGGTCAGCGA AGGCCTGGAC
GTCAGCCTGC GCATCGGCGA GCTGAACGAC AGCGGCATGA TCGCCCGACG CATCGGCACC
ACCCACCGGC TCACGGTGGC GACGCCCGAT TACCTGCGAC GCCACGGCCA CCCACAATCA
CCTCAGGATC TTGCGCAGCA CAACTGCCTG CAATTCAACC TGCTCAGCAC TCAGAACCTG
TGGACTTACG AGAAGGATGG CCAACACCAC GACGTACGCA TCCAGGGCAA CGCCCAGAGC
AACAACTCCG AAGCGATCCG CGAAATGGTC TTGGGAGGAC TGGGGGTTTC GCTGTCACCG
GTCTGGCTGT TCAGCGAAGA TTTGAAGGCG GGTCGAGTGA TCGCCCTGTT GCAGGACTAC
CAGACCCGAT CATTGCCGAT TCACGCCGTG TCCCCGGCGA ACCGTCGCCA GTCCGCCAGG
GTCAACGCGT TTGTCGACTT CATGACCCAG GCGCTGGCTG CAGCGCCCGA GCTTCAACCG
ATCAGATAG
 
Protein sequence
MDKLNAMAIF VRVVERGSFS AVARELHTTQ PTISKVLRAL ENELGGKLIA RSTRKLSLTD 
EGQRYYNECR NILAAVDAAE HSFQSGRETV AGPLRIGSSV SFGRLHIASR LAEFLQRFPQ
VQVDLQLSDQ NLDLVSEGLD VSLRIGELND SGMIARRIGT THRLTVATPD YLRRHGHPQS
PQDLAQHNCL QFNLLSTQNL WTYEKDGQHH DVRIQGNAQS NNSEAIREMV LGGLGVSLSP
VWLFSEDLKA GRVIALLQDY QTRSLPIHAV SPANRRQSAR VNAFVDFMTQ ALAAAPELQP
IR