Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3895 |
Symbol | |
ID | 3712233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4405620 |
End bp | 4406645 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | histone deacetylase superfamily protein |
Protein accession | YP_349623 |
Protein GI | 77460116 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGTT TTTTCCACCC CGAACAATTG CTCCACCATC CACGCAGCTA TTACTCGCGC GGGCAGATGC GTACGCCGCA GGAAGTTCCC GAGCGTGCGC AACGTCTGGT GCAGGCCGCC CACGGTCTGG GCTTCAGTGT CGAGCAACCC GCCGATGCCG GTCTCGCGCC GTTGCTGGCG GTGCATGGCG CGCCGTATCT GACCTTTCTT CAGGAAGCGC ACGCACGCTG GAAGGAAATC CCCGAAGACT GGGGCGATGA AGTGATGTCG AACATTTTCG TCCGCGAGCC CAACGCTTTG CGCGGCATTC TCGCCCAAGC GGCGCGCTAT CTGGCGGACG GCAGTTGCCC GGTCGGCGAG CAGACCTGGC GCTCGGCCTA CTGGTCGGCG CAAAGCGCAG TGGCCGGGGC GCAGGCGTTG ATTGATGGCG AGCCGGCAGC CTACGCCCTG TGCCGTCCGC CGGGGCATCA TGCCCGGGCC GAAGCGGCGG GCGGTTTCTG CTACGTGAAC AACGCAGCGG TGGCGGCGCA GGTGCTGCGC GACAAGTTTG AAAAAGTCGC GGTACTCGAC ACCGACATGC ACCACGGCCA GGGCATTCAG GAGATTTTCT ACGACCGCGA TGACGTGCTC TACGTCTCGG TGCATGGCGA TCCGACCAAC TTCTATCCGG GCGTCGCCGG GTTCGCCGAC GAACGTGGCA GCGGCGCGGG GGAGGGCTTC AACCTCAACC TGCCGATGGC CCATGGTTCA AGCGAAGCGG ATTTCCTTGG GCAACTGGAA GTCGCTTTGG CTGCCGTGCG CGAGTTCGGC GCTGAGGTGC TGGTGCTGTC GTTGGGCTTC GATATCTATG AGCTGGACCC GCAAAGCAAG GTCGCTGTGA CCCGCGAAGG TTTTGCAGCA CTGGGCGAGC GGATCCGCAG CCTGGACCTG CCATGCCTGA TCGTGCAGGA GGGCGGCTAT CACCTGGAAA GTCTCGAAGA CAACGCACGG GCGTTTTTCG TGAATGCTGA GGTGTGGCAG ATCTGA
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Protein sequence | MRSFFHPEQL LHHPRSYYSR GQMRTPQEVP ERAQRLVQAA HGLGFSVEQP ADAGLAPLLA VHGAPYLTFL QEAHARWKEI PEDWGDEVMS NIFVREPNAL RGILAQAARY LADGSCPVGE QTWRSAYWSA QSAVAGAQAL IDGEPAAYAL CRPPGHHARA EAAGGFCYVN NAAVAAQVLR DKFEKVAVLD TDMHHGQGIQ EIFYDRDDVL YVSVHGDPTN FYPGVAGFAD ERGSGAGEGF NLNLPMAHGS SEADFLGQLE VALAAVREFG AEVLVLSLGF DIYELDPQSK VAVTREGFAA LGERIRSLDL PCLIVQEGGY HLESLEDNAR AFFVNAEVWQ I
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