Gene Pfl01_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3895 
Symbol 
ID3712233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4405620 
End bp4406645 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content64% 
IMG OID 
Producthistone deacetylase superfamily protein 
Protein accessionYP_349623 
Protein GI77460116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGTT TTTTCCACCC CGAACAATTG CTCCACCATC CACGCAGCTA TTACTCGCGC 
GGGCAGATGC GTACGCCGCA GGAAGTTCCC GAGCGTGCGC AACGTCTGGT GCAGGCCGCC
CACGGTCTGG GCTTCAGTGT CGAGCAACCC GCCGATGCCG GTCTCGCGCC GTTGCTGGCG
GTGCATGGCG CGCCGTATCT GACCTTTCTT CAGGAAGCGC ACGCACGCTG GAAGGAAATC
CCCGAAGACT GGGGCGATGA AGTGATGTCG AACATTTTCG TCCGCGAGCC CAACGCTTTG
CGCGGCATTC TCGCCCAAGC GGCGCGCTAT CTGGCGGACG GCAGTTGCCC GGTCGGCGAG
CAGACCTGGC GCTCGGCCTA CTGGTCGGCG CAAAGCGCAG TGGCCGGGGC GCAGGCGTTG
ATTGATGGCG AGCCGGCAGC CTACGCCCTG TGCCGTCCGC CGGGGCATCA TGCCCGGGCC
GAAGCGGCGG GCGGTTTCTG CTACGTGAAC AACGCAGCGG TGGCGGCGCA GGTGCTGCGC
GACAAGTTTG AAAAAGTCGC GGTACTCGAC ACCGACATGC ACCACGGCCA GGGCATTCAG
GAGATTTTCT ACGACCGCGA TGACGTGCTC TACGTCTCGG TGCATGGCGA TCCGACCAAC
TTCTATCCGG GCGTCGCCGG GTTCGCCGAC GAACGTGGCA GCGGCGCGGG GGAGGGCTTC
AACCTCAACC TGCCGATGGC CCATGGTTCA AGCGAAGCGG ATTTCCTTGG GCAACTGGAA
GTCGCTTTGG CTGCCGTGCG CGAGTTCGGC GCTGAGGTGC TGGTGCTGTC GTTGGGCTTC
GATATCTATG AGCTGGACCC GCAAAGCAAG GTCGCTGTGA CCCGCGAAGG TTTTGCAGCA
CTGGGCGAGC GGATCCGCAG CCTGGACCTG CCATGCCTGA TCGTGCAGGA GGGCGGCTAT
CACCTGGAAA GTCTCGAAGA CAACGCACGG GCGTTTTTCG TGAATGCTGA GGTGTGGCAG
ATCTGA
 
Protein sequence
MRSFFHPEQL LHHPRSYYSR GQMRTPQEVP ERAQRLVQAA HGLGFSVEQP ADAGLAPLLA 
VHGAPYLTFL QEAHARWKEI PEDWGDEVMS NIFVREPNAL RGILAQAARY LADGSCPVGE
QTWRSAYWSA QSAVAGAQAL IDGEPAAYAL CRPPGHHARA EAAGGFCYVN NAAVAAQVLR
DKFEKVAVLD TDMHHGQGIQ EIFYDRDDVL YVSVHGDPTN FYPGVAGFAD ERGSGAGEGF
NLNLPMAHGS SEADFLGQLE VALAAVREFG AEVLVLSLGF DIYELDPQSK VAVTREGFAA
LGERIRSLDL PCLIVQEGGY HLESLEDNAR AFFVNAEVWQ I