| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3876 |
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| Symbol | |
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| ID | 3712522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4380704 |
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| End bp | 4383334 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_349604 |
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| Protein GI | 77460097 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.198302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.779454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAT CGCTGGTCAT TGTGGAATCC CCGGCTAAGG CCAAGACCAT CAACAAGTAT
CTGGGTAACC AATACGTGGT GAAGTCGAGT ATCGGCCATA TCCGAGACCT GCCCACCAGC
GGTTCGGCTA GCGCCAGCAA GGAGCCTGCC GCCAAGCGCG GCAAGGCTGC TGCGGGCGAA
GCGCCAGCGC TGTCGCCGAA AGAGAAGGCG CGCAAGCAGC TGGTCTCGCG CATGGGTGTC
GATCCCGAGC ACGGCTGGAA AGCCAAGTAC GAGATCCTCC CAGGCAAGGA AAAGGTCATC
GAAGAGCTGC GCCGGCTCGC CAAGGATGCT GACACCATCT ATCTCGCAAC CGACTTGGAT
CGCGAGGGGG AAGCCATTGC CTGGCACCTG CGCGAAGCCA TCGGTGGTGA CGACAGCCGC
TACAAGCGCG TGGTGTTCAA CGAAATCACC AAGAAGGCGA TTCAGGAAGC CTTCTCGGAG
CCGGGCGAAC TCGACATCGA TCGAGTGAAC GCGCAGCAGG CCCGTCGTTT CCTCGACCGC
GTTGTCGGCT ACATGGTTTC GCCGCTGCTG TGGGCGAAGA TCGCCCGTGG CCTGTCCGCC
GGTCGCGTGC AATCGGTTGC CGTGAAGCTG GTGGTGGAGC GTGAGCGCGA GATCCGTGCG
TTCAACCCGG AAGAGTACTG GGAAGTGCAC GCCGACCTCG GCACCGCCAA AGGCTCGACC
GTGCGTTTCG AAGTCGCTCG CGAGAAAGGC GAAGCGTTCA AGCCGCTGAA CGAAGCGCAG
GCCACGGCCG CGCTGGAGAA GCTCAAGTCC TCCAGCTACA GCATCGTCAA GCGTGAAGAC
AAACCGACCA GCAGCAAGCC GTCGGCACCG TTCATCACCT CCACACTGCA ACAGGCCGCG
AGCAACCGCC TGGGCTTCGG TGTGAAGAAA ACCATGATGA TGGCCCAGCG TCTGTACGAA
GCCGGCTACA TCACCTATAT GCGTACCGAC TCGACCAACC TCTCGGCTGA TGCCGTAGCG
ATGGCGCGCG ATTACATCGA AACCGAGTTC GGCAAGAAGT ACCTGCCGGA GTCGCCGAAC
GTTTACAGCA GCAAGGAAGG CGCACAAGAG GCTCACGAAG CGATTCGTCC TTCCGACGCC
AACACCACGC CAGCCAAGCT GGCCGGCATG GAGCGCGACG CTGAGCGCCT CTACGAGCTG
ATCTGGCGCC AGTTCCTGGC TTGCCAGATG CTGCCGGCGC AATACCTGTC GACCACCGTC
AGCGTCGCTG CTGGCGACTT CGAGCTGCGC GCCAAGGGCC GCATCCTGAA GTTCGACGGT
TACACCCGCG TGCTGCCGCA AATCACCAAG CCTGGCGACG ATGACGTTCT GCCGGACATG
GCGCAGGGCG ACGTGATGAA GCTTATAAAG CTCGATCCGT CCCAGCACTT CACCAAGCCG
CCGGCCCGTT ATTCGGAAGC CAGCCTGGTG AAGGAAATGG AAAAGCGCGG CATCGGTCGT
CCTTCGACCT ACGCAGCGAT CATCTCGACC ATTCAGGATC GCGGCTACGT GACCCTGCAC
AATCGTCGTT TCTATTCGGA AAAGATGGGC GACATCGTTA CCGAGCGTCT GTCGGAAAGC
TTCTCGAATC TCATGGACTA CGGCTTCACC GCCGGCATGG AAGAGAACCT CGATGACGTG
GCCCAAGGCG AGCGCGACTG GAAAAACGTG CTGGACGAGT TCTACGGCGA CTTCAAGAAA
AAACTCGAAG TGGCTGAAAA CCCAGAAGCT GGCATGCGTG CCAACCAGCC GGTGATGACC
GACATTCCGT GCACCACTTG CGGCCGTCCA ATGCAGATCC GTACTGCATC GACCGGCGTG
TTCCTCGGCT GCTCCGGCTA CAGCCTGCCG CCGAAAGAGC GCTGCAAGGC CACCGTCAAC
CTGGTGCCGG GCGATGAAAT CGCGGCGGAC GACGAGGGCG AGTCGGAATC CCTGGTACTG
CGCGGCAAGC ATCGCTGCCC GATCTGCAGC ACGGCGATGG ACGCTTACCT GCTCGACGAG
AAGCGCAAGC TGCACATCTG CGGTAACAAC CCGGATTGCG CCGGCTACGA GATCGAAGAG
GGCAGCTACC GCATCAAGGG CTACGAAGGC CCGAGCCTGG AATGCGACAA GTGCGGCAGC
GAGATGCAGC TCAAGACCGG CCGTTTCGGC AAGTTCTTCG GTTGCACCAA TCCGACGTGC
AAGAACACTC GCAAACTGCT GAAGAGCGGT GACGCGGCAC CGCCGAAGAT GGATCCGGTG
AAGATGCCTG AGCTGAAATG CGAAAAGGTC AACGACACCT ACATTCTGCG TGACGGTGCT
TCCGGCCTGT TCCTGGCGGC TAGCCAGTTC CCGAAAAACC GCGAGACCCG TGCTCCGCTG
GTGATTGAGA TTCTGCCGCA CAAGGATGAG ATCGATCCGA AGTATCACTT CCTGTGCGAA
GCGCCGCAGA AGGATCCGGA TGGTCTGCCA GCCGTGATCC GCTACAGCCG CAAGACCAAG
GAGCAATACG TTCAGACCGA AGTCGACGGC AAGCCGACTG GCTGGAAAGC ATTCTTTGAC
GGTGGCAAAT GGACGGTTGA AGACAAGCGT CCGGCGAAAG CCAAGGCTTG A
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| Protein sequence | MGKSLVIVES PAKAKTINKY LGNQYVVKSS IGHIRDLPTS GSASASKEPA AKRGKAAAGE
APALSPKEKA RKQLVSRMGV DPEHGWKAKY EILPGKEKVI EELRRLAKDA DTIYLATDLD
REGEAIAWHL REAIGGDDSR YKRVVFNEIT KKAIQEAFSE PGELDIDRVN AQQARRFLDR
VVGYMVSPLL WAKIARGLSA GRVQSVAVKL VVEREREIRA FNPEEYWEVH ADLGTAKGST
VRFEVAREKG EAFKPLNEAQ ATAALEKLKS SSYSIVKRED KPTSSKPSAP FITSTLQQAA
SNRLGFGVKK TMMMAQRLYE AGYITYMRTD STNLSADAVA MARDYIETEF GKKYLPESPN
VYSSKEGAQE AHEAIRPSDA NTTPAKLAGM ERDAERLYEL IWRQFLACQM LPAQYLSTTV
SVAAGDFELR AKGRILKFDG YTRVLPQITK PGDDDVLPDM AQGDVMKLIK LDPSQHFTKP
PARYSEASLV KEMEKRGIGR PSTYAAIIST IQDRGYVTLH NRRFYSEKMG DIVTERLSES
FSNLMDYGFT AGMEENLDDV AQGERDWKNV LDEFYGDFKK KLEVAENPEA GMRANQPVMT
DIPCTTCGRP MQIRTASTGV FLGCSGYSLP PKERCKATVN LVPGDEIAAD DEGESESLVL
RGKHRCPICS TAMDAYLLDE KRKLHICGNN PDCAGYEIEE GSYRIKGYEG PSLECDKCGS
EMQLKTGRFG KFFGCTNPTC KNTRKLLKSG DAAPPKMDPV KMPELKCEKV NDTYILRDGA
SGLFLAASQF PKNRETRAPL VIEILPHKDE IDPKYHFLCE APQKDPDGLP AVIRYSRKTK
EQYVQTEVDG KPTGWKAFFD GGKWTVEDKR PAKAKA
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