| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3864 |
|---|
| Symbol | |
|---|
| ID | 3712294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4365685 |
|---|
| End bp | 4366977 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | general substrate transporter |
|---|
| Protein accession | YP_349592 |
|---|
| Protein GI | 77460085 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCAA CGACCGGCAA AGGCAAGGCG ATTTTTCGCG TTGTCAGCGG CAACTTTCTC
GAGATGTTCG ACTTCATGGT CTACGGTTTC TACGCCACGG CCATTGCCAA GACCTTCTTT
CCCACCGACA GCGCCTTCGC TTCCCTGATG CTTTCTCTGG CCACTTTCGG CGCAGGTTTC
CTGATGCGTC CGCTGGGGGC GATTTTTCTC GGCGCCTACA TAGACCGTCA CGGCCGACGC
CAGGGCCTGA TCATCACATT GGCCCTGATG GCGGCCGGCA CCGTGCTGAT TGCCTGCGTG
CCGGGCTACG CCACCCTTGG GGTTGCCGCG CCGCTGATCG TGCTGTTCGG CCGCTTGCTG
CAAGGCTTCT CGGCTGGCGT CGAATTAGGC GGTGTGTCGG TGTACCTGGC GGAAATCGCC
ACGCCGGGCC GCAAGGGCTT TTTCGTCAGT TGGCAGTCCG CCAGCCAGCA GGCGGCCGTG
GTGTTCGCCG GCCTGCTCGG TGTCGCCCTC AACCATTGGC TGAGCCCTGA GCAGATGGGC
GAATGGGGCT GGCGGGTGCC GTTCCTGATC GGCTGCATGA TCGTCCCGGT GATTTTCGTC
ATCCGCCGCT CGCTGGAGGA AACCCCGGAG TTCCAGGCGC GCAAACATCG CCCTACCCTG
CAGGAAATTG TCCGCTCGAT CGGTCAGAAC TTTGGCATCG TCATCGCCGG CATGGCGCTG
GTGGTCATGA CCACGGTGTC GTTCTACCTG ATCACGGCCT ACACACCGAC GTTCGGCAAG
GCGGAATTGC ACCTGTCGGA CTTCGATGCG TTGCTGGTGA CCGTGTGCAT CGGTCTGTCG
AACTTCTTCT GGTTGCCGGT GATGGGCGCG GTGTCTGACA AGGTCGGGCG TAAACCCCTA
CTGCTGGCGG CGACGATTCT GGCGATCCTG ACCGCTTACC CGGCGCTGTC GTGGCTGGTG
GCGAACCCGA GCTTCAGCCA TTTGCTGATC GTCGAGCTGT GGCTGTCGTT CCTGTACGGC
TCGTACAACG GGGCAATGGT GGTGGCACTC ACCGAAATCA TGCCGGTAGA AGTTCGTACG
ACTGGCTTCT CGCTGGCCTA CAGCCTGGCG ACCGCCACCT TTGGTGGCTT TACCCCGGCG
GCCTGCACTT ATCTGATCCA TGTGCTGGAC AACAAGGCGG CACCGGGGAT CTGGCTCAGT
GGTGCAGCGG TATTGGGCGT GATCGCCACG CTGGTGCTGT TTCGTGGCAA CAGGCACGAA
CTGCGCACGG CACAAGCCGC CATCCCCCGC TAA
|
|---|
| Protein sequence | MSSTTGKGKA IFRVVSGNFL EMFDFMVYGF YATAIAKTFF PTDSAFASLM LSLATFGAGF
LMRPLGAIFL GAYIDRHGRR QGLIITLALM AAGTVLIACV PGYATLGVAA PLIVLFGRLL
QGFSAGVELG GVSVYLAEIA TPGRKGFFVS WQSASQQAAV VFAGLLGVAL NHWLSPEQMG
EWGWRVPFLI GCMIVPVIFV IRRSLEETPE FQARKHRPTL QEIVRSIGQN FGIVIAGMAL
VVMTTVSFYL ITAYTPTFGK AELHLSDFDA LLVTVCIGLS NFFWLPVMGA VSDKVGRKPL
LLAATILAIL TAYPALSWLV ANPSFSHLLI VELWLSFLYG SYNGAMVVAL TEIMPVEVRT
TGFSLAYSLA TATFGGFTPA ACTYLIHVLD NKAAPGIWLS GAAVLGVIAT LVLFRGNRHE
LRTAQAAIPR
|
|---|
| |