| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3800 |
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| Symbol | |
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| ID | 3714770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4302307 |
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| End bp | 4303968 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | diguanylate cyclase |
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| Protein accession | YP_349529 |
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| Protein GI | 77460022 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.223141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTTGCCC CACACAACCC GGTGGGCTAC GCTCACAAAA AACAAGGGTT TCGGGCTTTT
GCCCCTGTCG TACCTGCCCA GGACACGCTT TTGCCTATCC CCATTCACGA TCCGCATCAG
GCCCCCGGCG GCACTCTCAA GCGTTTGCCC CTGCGCAAGG CGGCGGTGTT GTTCATCGTT
GCCGTGTGTC TGTGCCTGTC CGGTCTGCTG TATTTGCAGA TCGAACAGTC GCGGCGCCAG
GATCTGGCCA ACGCGCAGGT GTCGTCGGCC AACCTGACCC GGGCGATGGC GCAGCAGGCT
GAAGACACGT TTCTGGCGGC GGATCTGGTG ATGACCAGCC TGGTCGACTG GGTTCAGGAA
GATGGCTACG GTGCGGCGCA GAAGCCGCGA TTGCAGCGAA CCTTCGCGCG GCGAGTGCAA
CAACTCGAGC AGTTGCACGG CATGTTCCTG TTCGACCGCG AAGGGCAGTG GGTGATTACC
TCGTTCCCGG ATCTGCCGCG CGGCAATGGC GTGGCCGATC GCGAGTACTT CAAGTTTCAC
CAGCAGAACG TGTCCGGTGT GGCGCACATC GGCCCGGCGA TCCGCAGCCG CGAGAACGGC
GAGTGGATCA TCCCGATCTC GAAACGGGTC AACGACCGCG CCGGCAATTT CCAGGGCGTG
TTGCTGGCCG GGATCAAGAT GTCGTACTTC GACAAGTTCT TCAAAAGCTT CAGCCTGGAC
GACAACGGCA CGATGTTTCT CGGCATGACT GACGGCACGT TGCTCGCCCG TCGGCCGTTC
GACGAGTCTC TGATCGGCAC CTCGCTGGCC AAGGGCGAGA TCTATCAGAA GCTGCTGCCC
AACGCCTCCG CCGGCACCGC GATGATCGAT TCGGTGGTCG ACGGTGTGAC GCGTCTTTAT
GGTTACCGGC AGCTGGAAAG CTACCCGTTG GTGGTCGCGG CGTCTTCGTC CCGGGACACG
ATTCTCCAGG GCTGGTATGA CCGGGCGTTT CAGTCCAGCG TGATCGTGGC GTTGGTGATG
CTCGGCGTGG CGCTGTTCGG CTGGGTGTTC ATTCATCAGG TGCGCGATGG CGAGCGGATC
GAAAAAAACC TGCGCAAGGC CCAGCAGGCG CTGGAGCAGA TCGCCACCCA CGACAGCCTG
ACCGGGCTGG CCAACCGGCG TCTGTTCGAG CGTTCGCTGG AGGTAGAGTT TGCCCGCGGT
GCGCGGCAGT CGAGCCCGGT CAGCCTGATC ATGCTCGATA TCGATTTTTT CAAACGCTAC
AACGATGCCT ACGGCCACGT GGCTGGCGAC CATTGCCTGA CGCAGGTCGC GCAGGTGGTG
AAAAACTGCT GCCAGCGCAA GTCCGATCTG GCGGTGCGCT ATGGCGGTGA AGAGTTCGCG
GTGCTGCTGC CGGACACCGA CATCAACGGC GCACTGGCAA TTGCCGGGCA GATCCGCCGC
AGCGTGATGG ACAAACACAT CACCCACAGC GGTTCGCCCA CCGGGTATCT CACGGTGAGC
CTGGGTTGCT ATGCGTTTAT TCCGACCGGC AACGACAGCC CGGAACTGTT CATTCAACGC
GCGGATGCGG CGCTGTATCA GGCCAAGAAC GCCGGCCGCA ACCGCGCGGC CGTGCTGTCA
ATGGACGTTG GCGTTGGCGA ACTGATGCGT TCGGATCGCT GA
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| Protein sequence | MVAPHNPVGY AHKKQGFRAF APVVPAQDTL LPIPIHDPHQ APGGTLKRLP LRKAAVLFIV
AVCLCLSGLL YLQIEQSRRQ DLANAQVSSA NLTRAMAQQA EDTFLAADLV MTSLVDWVQE
DGYGAAQKPR LQRTFARRVQ QLEQLHGMFL FDREGQWVIT SFPDLPRGNG VADREYFKFH
QQNVSGVAHI GPAIRSRENG EWIIPISKRV NDRAGNFQGV LLAGIKMSYF DKFFKSFSLD
DNGTMFLGMT DGTLLARRPF DESLIGTSLA KGEIYQKLLP NASAGTAMID SVVDGVTRLY
GYRQLESYPL VVAASSSRDT ILQGWYDRAF QSSVIVALVM LGVALFGWVF IHQVRDGERI
EKNLRKAQQA LEQIATHDSL TGLANRRLFE RSLEVEFARG ARQSSPVSLI MLDIDFFKRY
NDAYGHVAGD HCLTQVAQVV KNCCQRKSDL AVRYGGEEFA VLLPDTDING ALAIAGQIRR
SVMDKHITHS GSPTGYLTVS LGCYAFIPTG NDSPELFIQR ADAALYQAKN AGRNRAAVLS
MDVGVGELMR SDR
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