| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3738 |
|---|
| Symbol | |
|---|
| ID | 3714650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4224321 |
|---|
| End bp | 4225025 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_349467 |
|---|
| Protein GI | 77459960 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.966259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATT CTCTGTCTTC GATGATTGTC CCCGGCGTGC TCTGGGGGCT GGTGCTGTTT
TCCGTGGTCA GCTGGGCGAT CCTGCTGGTC AAGTCGGCGC AATACCTGCG CCAGAAAACC
CAGAACAAGC AGTTCAGCAA AGCCTTCTGG GGCGCGCCGG ATCTGCTGAC CGCCGCCGAA
CACGCCAGCC AGTATCCGGG CTCGCTGGCG CGGATCGCCA GCAGCGGTTT CGAAGCCCTG
CTGGTGGAAG AATCCCCGCG CACCACCCAG CAACTGGCGC ACACCATCAA CCGTTCCGAT
CGACTGGAAC GCAACCTGCG CCAGCAGATC CAGAAGGAAC GTCGCTCATT GGAAAACGGC
CAGGCGATCC TCGCCAGTAT CGGCAGCACC GCGCCGTTCA TTGGCCTGTT CGGCACCGTG
TGGGGAATCA TGGAAGCCCT GCAAAGCATC GGCGCCAGCG GCTCGGCCAG CCTGGAAACC
GTGGCCGGGC CGATCGGCCA CGCGCTGATC GCCACCGGTG TGGGGATTGC CGTCGCGGTG
CCGGCGGTGC TGATTTACAA CTTCTTCCTG CGGCGCCTGA AGCTGGCTTC GGCGGACATG
GATGACTTCG CCCACGACTT CGACGCCCTT GCCTCGCGCA GTGCGTTTTC CATCAGCCGC
CAGGCCATCG CCAAATCCGC GGCCGCCGTG CGGGAGGCCA GCTGA
|
|---|
| Protein sequence | MNDSLSSMIV PGVLWGLVLF SVVSWAILLV KSAQYLRQKT QNKQFSKAFW GAPDLLTAAE
HASQYPGSLA RIASSGFEAL LVEESPRTTQ QLAHTINRSD RLERNLRQQI QKERRSLENG
QAILASIGST APFIGLFGTV WGIMEALQSI GASGSASLET VAGPIGHALI ATGVGIAVAV
PAVLIYNFFL RRLKLASADM DDFAHDFDAL ASRSAFSISR QAIAKSAAAV REAS
|
|---|
| |