Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3693 |
Symbol | |
ID | 3715139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4179288 |
End bp | 4181159 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_349422 |
Protein GI | 77459915 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.261154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGA ATATCAGGGA CAATTCACAA GGCTGGATTG CCAAGACCAT TATCGGAGTC ATCGTTGCAC TGATGGCTCT GACCGGTTTC GACGCCATTT TCCAGGCCAC GACTCACAAG AATGAGGCGG CCAAGGTCAA CGGTGAAGAA ATCAGCCAGA ACGAGCTGAG CCAGGCGGTG GATATGCAAC GCCGTCAGCT GATGCAACAA CTGGGCAAGG ACTTCGACGC TTCCTTGCTG GACGAAAAAA TGCTGCGCGA ATCGGCCCTC AAGGGTCTGA TCGATCGCAA GCTGCTGCTG CAAGGCGCAG AACAATCGAA ATTCGCTTTC TCCGAAGCGG CCCTGGACCA AGTGATCCTG CAGACGCCTG AATTCCAGGT CGACGGCAAG TTCAGCTCCG ACCGTTTCGA TCAGGTGATC CGTCAACTGG GCTACAGCCG CATGCAGTTC CGCCAGATGC TGGCTCAGGA AATGCTGATC GGCCAACTGC GCGCCGGTGT GGCGGGCAGC GGTTTCGTGA CCGACGCTCA GGTGCTGGCC TTCGCCCGTC TGGAAAAACA GACCCGCGAC TTCGCCACGC TGAACATCAA GGCTGACCCT TCGGCCGTGA AGCTGACCGA TGACGAGGTC AAGGCTTACT ACGACGAGCA CGCCAAGGAG TTCATGACCC CGGATCAAGT GGTCATCGAT TACCTGGAAT TGAAGAAGTC TTCGTTCTTC GATCAGGTCG CCGTCAAGGA CGAAGACCTG CAGGCGGCGT ATCAGAAAGA GATCGCCAAC CTGTCGGAAC AGCGTCGTGC GGCGCACATT CTGATCGAAG TCAACGACAA GACCACCGAG GCCCAGGCCA AGGCGAAGAT CGAAGAAGTC CAGGCGCGTC TGGCCAAGGG CGAGAAATTC GAAGCGCTGG CCAAGGAGTT CTCGCAGGAT CCGGGTTCGG CCAACAACGG CGGTGACCTC GGTTATGCCG GTCCTGGCGT TTACGATCCA GCCTTCGAAA AAGCCCTGTA CTCTCTGAAC AAGGATCAGG TTTCCGAGCC GGTTCGCACC GACTTCGGTT TCCATCTGAT CAAGCTGCTG GGTGTCGAGG CGCCTGAAGT GCCGACGCTG GCCAGCCTGA AAGACAAGCT GACCCGCGAG CTGAAAACCC AGCAAGTCGA GCAGCGTTTC GTCGAGGCGA CCAAGCAACT GGAAGACTCT TCGTTCGAAG CCTCCGACCT GGCCCAGCCG GCGCAGGATC TTAAACTGAC CGTGCACACC TCCAAGCCGT TCGGCCGTGA AGGTGGCGAA GGCGTTGCAG CCAACCGTGC TGTAGTGACT GCCGCGTTCA GCACCGAAGT GCTGGAAGAG GGTGCCAACA GCACCGCCAT CGAGCTGGAT CCGGAAACCG TGATCGTGCT GCGCGCCAAG GAGCACCTCA AGCCTGCTCA ATTGCCGCTG GAAAGCGTGG CTGCTGCCAT TCGCACCCAG TTGACCAAAG AGCACGCCAG CGCGGCGGCC AAGACCCACG CCGAACAACT GATCGCCAGT CTGCGTGATG GCAAGACGCC GTTGGACAAA GCGGTCGACG GTCAGAGCTG GAAAGTCACT GAAGCGGCGA ACCGCGCTCA GGAAGGCGTT GACCCGGCGG TGCTGCAAGC ACTGTTCCGC ATGCCTAAGC CGGCTGCCAA GGACAAACCG ACCTTCACCA GCGTGACGCT GGCGGATGGT AGCCTGACCA TCGTGCGTCT GAACGGCGTG AACGAAGCGG CCGCTCCGAC CGATGAAGAG AAAGCGCAGT ACCGTCGCTT CCTCGCATCA CGTGTGGGCC AGCAAGACTT CGCGGCGTAC CGCAAGCAGC TGGAAGCCGA AGCCGACATC AAGCGTTTCT GA
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Protein sequence | MLQNIRDNSQ GWIAKTIIGV IVALMALTGF DAIFQATTHK NEAAKVNGEE ISQNELSQAV DMQRRQLMQQ LGKDFDASLL DEKMLRESAL KGLIDRKLLL QGAEQSKFAF SEAALDQVIL QTPEFQVDGK FSSDRFDQVI RQLGYSRMQF RQMLAQEMLI GQLRAGVAGS GFVTDAQVLA FARLEKQTRD FATLNIKADP SAVKLTDDEV KAYYDEHAKE FMTPDQVVID YLELKKSSFF DQVAVKDEDL QAAYQKEIAN LSEQRRAAHI LIEVNDKTTE AQAKAKIEEV QARLAKGEKF EALAKEFSQD PGSANNGGDL GYAGPGVYDP AFEKALYSLN KDQVSEPVRT DFGFHLIKLL GVEAPEVPTL ASLKDKLTRE LKTQQVEQRF VEATKQLEDS SFEASDLAQP AQDLKLTVHT SKPFGREGGE GVAANRAVVT AAFSTEVLEE GANSTAIELD PETVIVLRAK EHLKPAQLPL ESVAAAIRTQ LTKEHASAAA KTHAEQLIAS LRDGKTPLDK AVDGQSWKVT EAANRAQEGV DPAVLQALFR MPKPAAKDKP TFTSVTLADG SLTIVRLNGV NEAAAPTDEE KAQYRRFLAS RVGQQDFAAY RKQLEAEADI KRF
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