Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3682 |
Symbol | |
ID | 3715128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4166643 |
End bp | 4167503 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_349411 |
Protein GI | 77459904 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.903074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGT TCCAGCTCCG CGCCTTCGAC GCCGTGGCCC GGGAGGGCAG CTTCACCCGT GCCGCCGCAC GCCTGTTCAT CAGCCAGCCC GCGGTCACCG GGCACATCAA GGCGCTGGAG GAGCATTACC AGATCACCCT GTTGCGACGC ACGGCGCGCC GGGTCGAGCT GACGGAAGAG GGCACCAAAC TGGCAGCGAT CACCCGGGCG ATGTTCGGTA TGGCCGAGGA GGCCCAGGCG TTGCTCGAGG CCAATCGGCA ATTGCTCACC GGACGCCTTG AGGTGGCGGC GGATGGCCCG CACATGGTCA TGCCGATGCT CGCCAGCCTG CGGGCGCGCT ATCCGGGGAT CACCGTGAAT CTGCGGTTGG GCAATGCCCA GGAAACCTTG GCGGCGTTGT TGTCCGAGCA TGCCGATGTG GCGGTCTTGA CCGAGGTCGA GCCGCGCAAA GGGCTGCATC TGCAAGCGTT GAGTGAATCG CGGATCTGCG CGCTGGTGCC GGCCGCGCAT CCGTGGGCGA CACGTGCAGG CGAGGTCAGG CTCAAGGAGC TGGATCAGGT GATCATGGTC TTGCGCGAGC CGAGTTCGAT TACCCGGCGC ACGTTTGATC AGGCCTGTGC CCAGGCATCG GTCAGCCCAC GGGTGTTGCT GGAACTGGAC AGTCGCGAGG CGGTGACGGA AGCGGTGGCG GCTGAACTGG GGGTAGGGGT GGTGTCATCG GTGGAGGTCA GTCATGACCC CCGTGTCGTC GCGATTCCCA TTGCGGGAGA AGGGCTGGTG AACCGGCACA TGATCGGCTG CGTGGAGCGG CGGCGGGAGT TGCGCTTGAT TCAGGCGTTT TTCGGGTTGG CCCCGGTCTG A
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Protein sequence | MNLFQLRAFD AVAREGSFTR AAARLFISQP AVTGHIKALE EHYQITLLRR TARRVELTEE GTKLAAITRA MFGMAEEAQA LLEANRQLLT GRLEVAADGP HMVMPMLASL RARYPGITVN LRLGNAQETL AALLSEHADV AVLTEVEPRK GLHLQALSES RICALVPAAH PWATRAGEVR LKELDQVIMV LREPSSITRR TFDQACAQAS VSPRVLLELD SREAVTEAVA AELGVGVVSS VEVSHDPRVV AIPIAGEGLV NRHMIGCVER RRELRLIQAF FGLAPV
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