Gene Pfl01_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3604 
Symbol 
ID3714992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4073392 
End bp4074066 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content58% 
IMG OID 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_349333 
Protein GI77459826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACA ATCTCACCAG AATCGACCCC GATGCTCCTA ACGAGCAGTA TCCGATCGGC 
CAGCGGGAAA CCGTTTCCGA TCCGTTAGAA GATCAAGTCC ACAAAAACAT TTTCATGGGC
AAGCTGGAAG ACGTGCTGAG TGGCGCGGTC AACTGGGGAC GTAAGAACTC CCTGTGGCCG
TACAACTTCG GTCTGTCGTG CTGCTACGTG GAAATGACCA CCGCCTTCAC GGCGCCCCAC
GACATCGCGC GCTTCGGCGC CGAAGTTATC CGGGCTTCAC CGCGTCAGGC TGATTTCATG
GTTATCGCCG GGACCTGCTT CATCAAGATG GCGCCGATCA TTCAGCGCCT GTACGAGCAG
ATGCTCGAGC CGAAATGGGT TATCTCCATG GGTTCGTGCG CCAACTCCGG CGGCATGTAC
GACATCTACT CCGTGGTTCA GGGGGTGGAC AAGTTCCTGC CCGTTGACGT CTACGTACCT
GGCTGCCCGC CCCGTCCAGA AGCATTTCTG CAAGGTTTGA TGCTGTTGCA GGAATCCATT
GGCCAGGAGC GTCGCCCACT GTCCTGGGTC GTTGGCGATC AAGGCGTTTA TCGCGCCGAC
ATGCCTTCGC AGAAGGAACA GCGCCGCGAA CAGCGAATCG CAGTCACCAA CCTGCGCAGC
CCTGACGAAG TCTGA
 
Protein sequence
MQYNLTRIDP DAPNEQYPIG QRETVSDPLE DQVHKNIFMG KLEDVLSGAV NWGRKNSLWP 
YNFGLSCCYV EMTTAFTAPH DIARFGAEVI RASPRQADFM VIAGTCFIKM APIIQRLYEQ
MLEPKWVISM GSCANSGGMY DIYSVVQGVD KFLPVDVYVP GCPPRPEAFL QGLMLLQESI
GQERRPLSWV VGDQGVYRAD MPSQKEQRRE QRIAVTNLRS PDEV