Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3596 |
Symbol | mnmA |
ID | 3714984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4064811 |
End bp | 4065935 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_349325 |
Protein GI | 77459818 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGATC CAGCCCCTTC TGACACATCC AAGAAGCGCG TCATTGTCGG CATGTCCGGC GGCGTGGACT CTTCCGTTTC CGCTCTCCTG CTGATCGAGC AGGGCTATGA AGTGGAAGGC CTGTTCATGA AGAACTGGGA AGAAGACGAC GGAACGGAAT ACTGCACCGC CATGGACGAC CTGGCGGATG CCCAGGCCGT GTGCGACAAG ATCGGTATCA AGCTGCACAC CGCCAACTTC GCCGCCGAGT ACTGGGACAA CGTGTTCGAG CACTTCCTGG CCGAATACAA GGCCGGCCGC ACGCCGAACC CGGACATCCT GTGTAACCGC GAGATCAAGT TCAAGGCGTT CCTCGACTAC GCCATGATGC TCGGCGCCGA TCTGATCGCC ACCGGTCACT ACGTGCGCCG TCGCGACATC GATGGCCGCA CCGAACTGCT CAAGGGCCTG GATCCGAACA AGGATCAGAG CTACTTCCTG CACGCTGTCG GCGGCGAACA GATCGCCAAG ACCCTGTTCC CGGTCGGCGA GCTGGAAAAA CCGGAAGTCC GTGCAATTGC CGAGAAATAC GAGCTGGCGA CCGCCAAGAA GAAGGATTCC ACCGGGATCT GCTTCATCGG CGAGCGTCGC TTCAGCGATT TCCTCAAGCA ATACCTGCCG GCACAACCGG GCGAGATCAA GACCACCGAA GGCGAAGTCA TCGGCCGTCA CCACGGTTTG ATGTACCACA CTATCGGCCA GCGTCAGGGC CTGGGCATCG GTGGTCTGAA AGACGCCGGC GACGAGCCGT GGTACGTGCT GCGCAAGGAT CTGGACACCA ACGAGCTGAT CGTCGGTCAG GGCAACAACC ATCCGTGGCT GTTCTCCAGC GCCCTGCTCG CTTCGGAAAT CTATTGGGTC AATCCGATCG ATCTGAGCCA GCCGCTGCGT CTGACCGCCA AAGTCCGTTA TCGCCAGAGC GATCAGGCCT GCACCCTTGA GAAAACCGAC ACCGGCTATC GCGCCGTGTT CGACGAGCCG CAACGCGCGG TCACGCCGGG CCAGTCGGTG GTGTTCTATG ACGGTGAAAT CTGCCTCGGT GGCGGCGTGA TCGAAGTCGC CGAGCCTTGG AGCGGCCAGG CATGA
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Protein sequence | MRDPAPSDTS KKRVIVGMSG GVDSSVSALL LIEQGYEVEG LFMKNWEEDD GTEYCTAMDD LADAQAVCDK IGIKLHTANF AAEYWDNVFE HFLAEYKAGR TPNPDILCNR EIKFKAFLDY AMMLGADLIA TGHYVRRRDI DGRTELLKGL DPNKDQSYFL HAVGGEQIAK TLFPVGELEK PEVRAIAEKY ELATAKKKDS TGICFIGERR FSDFLKQYLP AQPGEIKTTE GEVIGRHHGL MYHTIGQRQG LGIGGLKDAG DEPWYVLRKD LDTNELIVGQ GNNHPWLFSS ALLASEIYWV NPIDLSQPLR LTAKVRYRQS DQACTLEKTD TGYRAVFDEP QRAVTPGQSV VFYDGEICLG GGVIEVAEPW SGQA
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