| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3535 |
|---|
| Symbol | |
|---|
| ID | 3713835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4012744 |
|---|
| End bp | 4013376 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_349264 |
|---|
| Protein GI | 77459757 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.926686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.288543 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACCA CTGAAACTCC GGAACCCGCA CAACCTCGTC GCCGCCTGTC CCGGGAAGAC
CGCCAGCGCC AGTTGCTCGA CGTGGCCTGG CAGCTGATTC GCGAAGAAGG CACCGATGCC
CTGACCCTCG GCTATCTGGC GGAAAAGGCC GGTGTGACCA AACCGGTGGT CTACGACCAC
TTCACCACTC GCGCCGGTCT GCTCGCGGCG CTGTATCAGG ATTTCGACCG GCGCCAGACG
GCGCTGATGG ACGCCGCACT GGCTGATGCC GAAGCAACCC TGAGCGGCAC TGCGACGGTG
ATTGCCACGG CGTATGTCGA TTGCGTGATG ACCCAGGGCA ACGAGATTCC GGGAGTGATT
GCCGCCCTGG CGAGTACGCC GGAACTGGAG AGGATCAAAC GCGAATACGA GGCGATTTTC
CTGGAGAAGT GCCGCAGCGT GCTCTCGCCA TTCGCGGACG GCGCAGAGAT CGGTCAGGCA
GGATTACGCG CCATGCTCGG CGCCGCTGAA GCCCTGTCGC AAGCGGCGGC CACCGACGAA
ATCAGCGCCG AACAGGCCCG TGACGAGCTG TTGGCAACCA TCATTGCGAT GGTCGAAAGA
GCCGCTGCCC GCGCCCTCAA AGCAGGTGAC TGA
|
|---|
| Protein sequence | MSTTETPEPA QPRRRLSRED RQRQLLDVAW QLIREEGTDA LTLGYLAEKA GVTKPVVYDH
FTTRAGLLAA LYQDFDRRQT ALMDAALADA EATLSGTATV IATAYVDCVM TQGNEIPGVI
AALASTPELE RIKREYEAIF LEKCRSVLSP FADGAEIGQA GLRAMLGAAE ALSQAAATDE
ISAEQARDEL LATIIAMVER AAARALKAGD
|
|---|
| |