Gene Pfl01_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3528 
Symbol 
ID3713828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4006626 
End bp4007294 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content64% 
IMG OID 
ProductHAD family hydrolase 
Protein accessionYP_349257 
Protein GI77459750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.58335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.428685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGCTC ACGATGCTGT TTTCAACCGC GCGTTCGGCG CGTTCCTGTT CGACATGGAC 
GGCACCGTCC TCAATTCCAT CGCCGCCGCC GAGCGGATCT GGTCCGCCTG GGCCGTGCGC
CACGGGGTGA ACGTCGAAAC GTTCCTGCCG ACCATCCATG GCGTGCGCGC CATCGACACC
ATCACGCGTT TGAACCTGCC GGGCGTGGAC GCCGAGGCGC AAGCGGCGTT CATCACCGAG
GCGGAAATCG AAGACGTCGA AGGCATCGTC GAGATCCCCG GCGCGGCAGC GTTTCTCAAA
TCGTTGCCGG CGGATCGCTG GGCCATGGTG ACCTCGGCGC CACGGGATCT GGCGTTGCGG
CGGATGGGCG CGGCGGGGAT TCCTGAACCG GCGGTGATGA TCACCGCTGA AGATGTGACC
GCTGGCAAAC CGGATCCGGC CGGTTATCGT CTGGCGGCCA GACGCCTGGG GCTGGAGCCG
GCGGATTGCC TGATTTTCGA AGACGCCACT GTCGGTATTC AGGCCGCTGA AGCCGCGGGT
GCGCCGTTGA TGATCATCAC CACGACTCAC CAGCATCCGC TCGAAACCGC CCACGCGACC
ATCGCCAGTT ACCGCGACAT TGCGCTGAGC ATCGACAGCG ACGGCCAGTT GCGTCTGCAA
CCTCAATAA
 
Protein sequence
MSAHDAVFNR AFGAFLFDMD GTVLNSIAAA ERIWSAWAVR HGVNVETFLP TIHGVRAIDT 
ITRLNLPGVD AEAQAAFITE AEIEDVEGIV EIPGAAAFLK SLPADRWAMV TSAPRDLALR
RMGAAGIPEP AVMITAEDVT AGKPDPAGYR LAARRLGLEP ADCLIFEDAT VGIQAAEAAG
APLMIITTTH QHPLETAHAT IASYRDIALS IDSDGQLRLQ PQ