Gene Pfl01_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3519 
Symbol 
ID3713742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3998706 
End bp3999389 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID 
Producttwo component transcriptional regulator 
Protein accessionYP_349248 
Protein GI77459741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.683413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.634912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCA TCCTCACCAT CGAAGACGAC GCCGTGACCG CCCGGGAAAT TGTCGCCGAA 
CTGAGCAGCC ACGGCCTCGA CGTGGACTGG GTCGACAACG GCCGTGAAGG CCTGGACCGC
GCCGTCAGCG GCAACTACGA CCTGATCACC CTCGACCGCA TGCTGCCGGA ACTCGATGGC
CTGGCCATCG TCACCACCCT GCGCACCATG GGCGTGGCCA CGCCGATCCT GATGATCAGC
GCCCTTTCCG ATGTCGACGA GCGCGTGCGC GGCTTGCGCG CCGGCGGCGA TGATTACCTG
ACCAAACCGT TCGCCACCGA TGAAATGGCC GCCCGGGTCG AAGTGTTGCT GCGTCGGCAG
AACAGCAACG GCGCCCAGCC GACCACGTTG CAGGTGGCGG ATCTGCAACT CGACCTGATC
AGCCACGAAG CCCGTCGCGC CGAGCAAGTG CTGACGCTGC TGCCGACCGA GTACAAGTTG
CTGGAATTCC TGATGCGCAA CAGCGGTCAG ATCCTGTCGC GGATGATGAT TTTCGAGGAA
GTCTGGGGCT ACCACTTCGA CCCCGGCACC AACCTGATCG ACGTGCACAT CGGCCGTCTG
CGCAAGAAGA TCGACCCGCC GGGCAATGTC CCGCTGATCC GTACGGTGCG AGGCTCGGGT
TATGTCATTG CCGAACCCGT CTGA
 
Protein sequence
MTRILTIEDD AVTAREIVAE LSSHGLDVDW VDNGREGLDR AVSGNYDLIT LDRMLPELDG 
LAIVTTLRTM GVATPILMIS ALSDVDERVR GLRAGGDDYL TKPFATDEMA ARVEVLLRRQ
NSNGAQPTTL QVADLQLDLI SHEARRAEQV LTLLPTEYKL LEFLMRNSGQ ILSRMMIFEE
VWGYHFDPGT NLIDVHIGRL RKKIDPPGNV PLIRTVRGSG YVIAEPV