Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3519 |
Symbol | |
ID | 3713742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3998706 |
End bp | 3999389 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_349248 |
Protein GI | 77459741 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.683413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.634912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCGCA TCCTCACCAT CGAAGACGAC GCCGTGACCG CCCGGGAAAT TGTCGCCGAA CTGAGCAGCC ACGGCCTCGA CGTGGACTGG GTCGACAACG GCCGTGAAGG CCTGGACCGC GCCGTCAGCG GCAACTACGA CCTGATCACC CTCGACCGCA TGCTGCCGGA ACTCGATGGC CTGGCCATCG TCACCACCCT GCGCACCATG GGCGTGGCCA CGCCGATCCT GATGATCAGC GCCCTTTCCG ATGTCGACGA GCGCGTGCGC GGCTTGCGCG CCGGCGGCGA TGATTACCTG ACCAAACCGT TCGCCACCGA TGAAATGGCC GCCCGGGTCG AAGTGTTGCT GCGTCGGCAG AACAGCAACG GCGCCCAGCC GACCACGTTG CAGGTGGCGG ATCTGCAACT CGACCTGATC AGCCACGAAG CCCGTCGCGC CGAGCAAGTG CTGACGCTGC TGCCGACCGA GTACAAGTTG CTGGAATTCC TGATGCGCAA CAGCGGTCAG ATCCTGTCGC GGATGATGAT TTTCGAGGAA GTCTGGGGCT ACCACTTCGA CCCCGGCACC AACCTGATCG ACGTGCACAT CGGCCGTCTG CGCAAGAAGA TCGACCCGCC GGGCAATGTC CCGCTGATCC GTACGGTGCG AGGCTCGGGT TATGTCATTG CCGAACCCGT CTGA
|
Protein sequence | MTRILTIEDD AVTAREIVAE LSSHGLDVDW VDNGREGLDR AVSGNYDLIT LDRMLPELDG LAIVTTLRTM GVATPILMIS ALSDVDERVR GLRAGGDDYL TKPFATDEMA ARVEVLLRRQ NSNGAQPTTL QVADLQLDLI SHEARRAEQV LTLLPTEYKL LEFLMRNSGQ ILSRMMIFEE VWGYHFDPGT NLIDVHIGRL RKKIDPPGNV PLIRTVRGSG YVIAEPV
|
| |