Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3443 |
Symbol | |
ID | 3713451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3927892 |
End bp | 3929166 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | dihydropyrimidine dehydrogenase |
Protein accession | YP_349172 |
Protein GI | 77459665 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.462217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATC TCTCGATAGT CTTCGCCGGT ATCAAAGCCC CCAACCCGTT CTGGCTGGCC TCCGCGCCGC CGACCGACAA GGCCTACAAC GTGGTGCGCG CCTTCGAGGC CGGCTGGGGC GGCGTGGTCT GGAAAACCCT GGGTGAAGAC CCGGCGGCGG TCAACGTGTC GTCGCGTTAT TCGGCGCATT ACGGCGCCAA CCGCGAAGTG CTGGGCATCA ACAACATCGA ACTGATCACC GACCGCTCGC TGGAAATCAA CCTGCGGGAA ATCACCCAGG TGAAAAAGGA CTGGCCGGAT CGCGCGCTGA TCGTGTCGCT GATGGTGCCC TGCGTCGAAG AGTCGTGGAA ACACATCCTG CCGTTGGTGG AAGCCACCGG CGCCGACGGC ATCGAGCTGA ATTTCGGCTG CCCCCACGGC ATGCCCGAGC GCGGCATGGG CGCGGCGGTC GGTCAGGTGC CGGAGTACGT CGAGCAGGTC ACGCGCTGGT GCAAGACCTA TTGCTCGCTG CCGGTGATCG TCAAACTCAC ACCGAACATC ACCGACATCC GCGTCGCCGC CCGAGCCGCA CACCGGGGCG GCGCCGATGC GGTGTCGCTG ATCAACACCA TCAACTCGAT CACCAGCGTC GACCTCGAAC ACATGGTCGC CCTGCCCACC GTCGGCAGCA AAAGCACCCA CGGCGGTTAT TGCGGCTCGG CGGTCAAGCC GATCGCGCTG AACATGGTCG CGGAAATCGC CCGTGACCCG CAGACCCAGG GCCTGCCGAT CTGCGGCATT GGCGGCATTG GCAGCTGGCG TGACGCGGCG GAGTTCATCG CACTGGGCAG CGGCGCGGTG CAAGTGTGCA CGGCGGCGAT GCTGCACGGC TTCCGGATTG TCGATGAGAT GAAGGATGGC CTGTCGCGGT GGATGGACAG TCAGGGTTAC GCCAGCATTG CCGAGTTTTC CGGGCGCGCG GTGGGCAACA CCACGGACTG GAAGTATTTG GACATCAACT ATCAGGTCAT CGCGAAGATC GATCAGGAAG CGTGTATCGG ATGCGGGCGT TGCCACATTG CCTGCGAAGA CACTTCACAC CAGGCGATCA GCAGTCTGAA ACAGGCCGAT GGCACGCATA AATATGAAGT GATCGATGAT GAGTGTGTGG GGTGCAATCT GTGCCAGATC ACCTGTCCGG TGGCGGACTG CATCGAGATG GTGCCGATGG AAACGGGCAA GCCGTTTCTG GACTGGAATC ATGATCCGAG GAATCCGTAT CACGTTGCGG TCTAG
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Protein sequence | MADLSIVFAG IKAPNPFWLA SAPPTDKAYN VVRAFEAGWG GVVWKTLGED PAAVNVSSRY SAHYGANREV LGINNIELIT DRSLEINLRE ITQVKKDWPD RALIVSLMVP CVEESWKHIL PLVEATGADG IELNFGCPHG MPERGMGAAV GQVPEYVEQV TRWCKTYCSL PVIVKLTPNI TDIRVAARAA HRGGADAVSL INTINSITSV DLEHMVALPT VGSKSTHGGY CGSAVKPIAL NMVAEIARDP QTQGLPICGI GGIGSWRDAA EFIALGSGAV QVCTAAMLHG FRIVDEMKDG LSRWMDSQGY ASIAEFSGRA VGNTTDWKYL DINYQVIAKI DQEACIGCGR CHIACEDTSH QAISSLKQAD GTHKYEVIDD ECVGCNLCQI TCPVADCIEM VPMETGKPFL DWNHDPRNPY HVAV
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