Gene Pfl01_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3411 
Symbol 
ID3713419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3890522 
End bp3891547 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349140 
Protein GI77459633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC CAAGCCGGCA TGCCCCTGTC GCTCTGACCC TGAGCCAGCG CCTGCGCCGT 
GATCCGCAGG CGTTCGAATG GTTGCAGGCG CTGCTGTTGC TGGAGCGTGA ACAGCCGCAG
GCCGACGCCC TCGGCTCGGG GACATCGCCA CAGGCCGAAG CGCTGAAATT GCGCGGGCCG
CTGACGCCAT TATTCGCCGC CAGTCAGATC GAAAGCCTGG AGGAAAACCC CGGTGAACCG
CTGACCCTGA ACTCGCCGAT GTTCGGCCTC GGCGGCCCCG ACGGCCCGCT GCCTTACGCT
TATCAGGAAT GGCTGCAACA ACGGGCGCGG GCCAAGGATC ATGCGCCCGC CGAGTTCCTC
GACCTGTTCC AGCATCGGCT GCTGAGCCTG CTGTACAAGG TGATGCGCAA ACACCGGATC
GCCCTCGGTT TCACCACGCC CGGCGCCTCG CCAGTGCAGG CGCAACTGCG GGCGCTGACC
GGGTTGTTGC CCAAATCCCT GCAAGAACGC CAGGCGGTTC CCGACTGCGC CGTTCTGGCC
TGCACGGCGT TGTACGCCGA TGGCCGCCGG TCGTTGGCGG GGTTCGCGGC GATTGTCCGC
GAGCAATTTG CCGTGGCGGT GGAACTGAGC GCTTATGAAG GGGCGTGGCG TGAAATTCCA
CGCGCCAGCC GCAGCGTCAT GAAGGCCGGC GGACGCAATC TGCAACTCGG CCGTAGCGCT
GTCGCCGGTA CTCGGGTCTG GGATGAACAT GCCGGAATTC GTCTGACGCT GGGGCCGCTG
CCATCGACGC AGGCCGCGCG CTTCTTGCCG GACGGCGAAG CGCATCCGGC ACTGGCGAGC
CTCGCTGCGC TGTATTTCGG CCCGGATCTA GACGTGAAAC TGGTGCTGCT GGTGCGCGGT
GCGGGGCCGC TGCAACTCGG CCGACAAACC CCGGCCCTGT TGAGCTGGAA CGGTGGCCTG
CAACGGCAGA CCAGCCTGGC CGTGCAACGG ATCGAAACCC GCCTGCGTCA GCTGGAGATC
ACCTGA
 
Protein sequence
MATPSRHAPV ALTLSQRLRR DPQAFEWLQA LLLLEREQPQ ADALGSGTSP QAEALKLRGP 
LTPLFAASQI ESLEENPGEP LTLNSPMFGL GGPDGPLPYA YQEWLQQRAR AKDHAPAEFL
DLFQHRLLSL LYKVMRKHRI ALGFTTPGAS PVQAQLRALT GLLPKSLQER QAVPDCAVLA
CTALYADGRR SLAGFAAIVR EQFAVAVELS AYEGAWREIP RASRSVMKAG GRNLQLGRSA
VAGTRVWDEH AGIRLTLGPL PSTQAARFLP DGEAHPALAS LAALYFGPDL DVKLVLLVRG
AGPLQLGRQT PALLSWNGGL QRQTSLAVQR IETRLRQLEI T