Gene Pfl01_3410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3410 
Symbol 
ID3713418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3888789 
End bp3890558 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349139 
Protein GI77459632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCGACT ACTACCAGCG CGAACTGACC TGGCTGCGAC ATGCCGGCGG ACAGTTTGCC 
GAACGCTATC CGAAAGTCGC GCGACGTCTG GAGTTGTCTC CCGGCGAATG CCCGGACCCA
CACGTCGAAC GATTGCTGGA AGGTTTTGCC CTGCTCGCCG CACGTCTGCA ACGGCGGCTG
GATGACGACT ACGCCGAGTT CAGCGACGCA TTGCTCGAAC AGCTTTATCC CCTGGCCATG
CGCCCGCTGC CGTCCTGCGC GATCGTCCAG TTCGAACCGG ACCCGAGCAA AGGCAACCTC
GACGGCGGCT ATCCCCTGCC CCGGGACACG CCGTTGTTCG TCACCACCAG CAAGGGCGAA
AGCATTCACT TTCGCACCAG CGCCGCCGTG CGTTTGTGGC CGGTTGAAGT CAGCGAAGCG
TTGTTGCTGG GCAGCGATGA AGCCCAGGCG CTGACCGGTG TGGCGCAGTC CCGCTCGGCG
TTGCGCCTGA GTCTGCGTTG CCTCGGCGAC AGTCAGTGGT CGGAGCTTGG CATCGAACAA
CTGCGCATTC ACCTGGCCGC GTCACCGGTG GTCAACGCCA ACCTCTATGA CCTGCTCGGC
GCCCACGCGG TGCAGGTGTT GGCCGGCTCA CCGGGGAGCA TTCCCGCCCG CGTGAAAGGC
CTGCCGAAGA TCGTCGGTTT CGCCGACGAC GAAGTGCTGC TGCCGGACGA AGACGGCGTG
CATCCGGGCA TGCGTCTGCT GGCCGAATAC TTCGCGTTCC CGGACAAATT CCACTTCTTT
GATCTGCCCC TGTCCGGTGT TTCGAGTGAC AGCCAGACGC TGTATCTGTA CATCGTTTTT
GACCGGGCGC CGGCCGGCCG ATTGCACTTG CAGGCCACTG AAATCGCCCT CGGCTGTGCG
CCGGTGATCA ACCTGTTCCC GCGTACCTCG GAGCCGCTGC GTCCGGACGG CACCCGCAGC
GAATATCGCC TGATCGCCGA CAGCCACCGT GAAAACAGCG TCGAAATCCA CAGCATTCGC
AGCATGCGCG CCAGCTCCGC CAGCGGGGTG CAACGGCTGC CGGCGTATTT CGGCAGCCAG
CACAGCAGCG GTGACCGGCA ACGTTACTGG CATGCGCGGC GAGTCAACGG ACAGACGCCG
AACCGGCTCG GCAGCGATCT GCTGGTCAGC GTCGTCGACA CCCGTTTCGA ACCGCAGACC
GACCTGCCCG ATTACAGCCT GACCGCCGAA CTGCTGTGCA CCAATCGGCA TCTGGCCCAG
AGCCTGCCCG CCGGTACGCC GCTGGGTTTC GAACGGCCGG GTCCGGTGGC GTGGGCACGC
TTGCGCAATC CGCCGAGCCC GCAAAGCCTG CCGCGACTGG ACGGTGATTC GCGCTGGCGG
CTAGTGTCGC AACTGACCCT CAATCACCTG TCGCTGGTCG AAGGGCCGCA GGCGCTGGAT
GCGCTGAAGG AAATCCTGAC CCTGCACAAC CTGCGCGACG AGGCCAGCGC CCTGCGCCAG
ATCGAAGGAT TGCTGAACCT TGGTTGCGAG CGGGTGATCG GCCATGTCGG CGCCGACGCC
TGGCGCGGCT GGCGCAACGG GCTTGAAGTG CAATTGCAGC TTGATCCACA GCATTTCGTC
GGCAGCAGCG CGGTGTTGTT TTCAGCGGTG CTCGCGCAGT TCTTTTCGGT GTACGCCACG
GCCAATCGCT TTGTGCGCAC GGTGCTCATG CAGGCAGACA AGGAGGTCAA GGCATGGCAA
CCCCAAGCCG GCATGCCCCT GTCGCTCTGA
 
Protein sequence
MLDYYQRELT WLRHAGGQFA ERYPKVARRL ELSPGECPDP HVERLLEGFA LLAARLQRRL 
DDDYAEFSDA LLEQLYPLAM RPLPSCAIVQ FEPDPSKGNL DGGYPLPRDT PLFVTTSKGE
SIHFRTSAAV RLWPVEVSEA LLLGSDEAQA LTGVAQSRSA LRLSLRCLGD SQWSELGIEQ
LRIHLAASPV VNANLYDLLG AHAVQVLAGS PGSIPARVKG LPKIVGFADD EVLLPDEDGV
HPGMRLLAEY FAFPDKFHFF DLPLSGVSSD SQTLYLYIVF DRAPAGRLHL QATEIALGCA
PVINLFPRTS EPLRPDGTRS EYRLIADSHR ENSVEIHSIR SMRASSASGV QRLPAYFGSQ
HSSGDRQRYW HARRVNGQTP NRLGSDLLVS VVDTRFEPQT DLPDYSLTAE LLCTNRHLAQ
SLPAGTPLGF ERPGPVAWAR LRNPPSPQSL PRLDGDSRWR LVSQLTLNHL SLVEGPQALD
ALKEILTLHN LRDEASALRQ IEGLLNLGCE RVIGHVGADA WRGWRNGLEV QLQLDPQHFV
GSSAVLFSAV LAQFFSVYAT ANRFVRTVLM QADKEVKAWQ PQAGMPLSL