Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3410 |
Symbol | |
ID | 3713418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3888789 |
End bp | 3890558 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349139 |
Protein GI | 77459632 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCTCGACT ACTACCAGCG CGAACTGACC TGGCTGCGAC ATGCCGGCGG ACAGTTTGCC GAACGCTATC CGAAAGTCGC GCGACGTCTG GAGTTGTCTC CCGGCGAATG CCCGGACCCA CACGTCGAAC GATTGCTGGA AGGTTTTGCC CTGCTCGCCG CACGTCTGCA ACGGCGGCTG GATGACGACT ACGCCGAGTT CAGCGACGCA TTGCTCGAAC AGCTTTATCC CCTGGCCATG CGCCCGCTGC CGTCCTGCGC GATCGTCCAG TTCGAACCGG ACCCGAGCAA AGGCAACCTC GACGGCGGCT ATCCCCTGCC CCGGGACACG CCGTTGTTCG TCACCACCAG CAAGGGCGAA AGCATTCACT TTCGCACCAG CGCCGCCGTG CGTTTGTGGC CGGTTGAAGT CAGCGAAGCG TTGTTGCTGG GCAGCGATGA AGCCCAGGCG CTGACCGGTG TGGCGCAGTC CCGCTCGGCG TTGCGCCTGA GTCTGCGTTG CCTCGGCGAC AGTCAGTGGT CGGAGCTTGG CATCGAACAA CTGCGCATTC ACCTGGCCGC GTCACCGGTG GTCAACGCCA ACCTCTATGA CCTGCTCGGC GCCCACGCGG TGCAGGTGTT GGCCGGCTCA CCGGGGAGCA TTCCCGCCCG CGTGAAAGGC CTGCCGAAGA TCGTCGGTTT CGCCGACGAC GAAGTGCTGC TGCCGGACGA AGACGGCGTG CATCCGGGCA TGCGTCTGCT GGCCGAATAC TTCGCGTTCC CGGACAAATT CCACTTCTTT GATCTGCCCC TGTCCGGTGT TTCGAGTGAC AGCCAGACGC TGTATCTGTA CATCGTTTTT GACCGGGCGC CGGCCGGCCG ATTGCACTTG CAGGCCACTG AAATCGCCCT CGGCTGTGCG CCGGTGATCA ACCTGTTCCC GCGTACCTCG GAGCCGCTGC GTCCGGACGG CACCCGCAGC GAATATCGCC TGATCGCCGA CAGCCACCGT GAAAACAGCG TCGAAATCCA CAGCATTCGC AGCATGCGCG CCAGCTCCGC CAGCGGGGTG CAACGGCTGC CGGCGTATTT CGGCAGCCAG CACAGCAGCG GTGACCGGCA ACGTTACTGG CATGCGCGGC GAGTCAACGG ACAGACGCCG AACCGGCTCG GCAGCGATCT GCTGGTCAGC GTCGTCGACA CCCGTTTCGA ACCGCAGACC GACCTGCCCG ATTACAGCCT GACCGCCGAA CTGCTGTGCA CCAATCGGCA TCTGGCCCAG AGCCTGCCCG CCGGTACGCC GCTGGGTTTC GAACGGCCGG GTCCGGTGGC GTGGGCACGC TTGCGCAATC CGCCGAGCCC GCAAAGCCTG CCGCGACTGG ACGGTGATTC GCGCTGGCGG CTAGTGTCGC AACTGACCCT CAATCACCTG TCGCTGGTCG AAGGGCCGCA GGCGCTGGAT GCGCTGAAGG AAATCCTGAC CCTGCACAAC CTGCGCGACG AGGCCAGCGC CCTGCGCCAG ATCGAAGGAT TGCTGAACCT TGGTTGCGAG CGGGTGATCG GCCATGTCGG CGCCGACGCC TGGCGCGGCT GGCGCAACGG GCTTGAAGTG CAATTGCAGC TTGATCCACA GCATTTCGTC GGCAGCAGCG CGGTGTTGTT TTCAGCGGTG CTCGCGCAGT TCTTTTCGGT GTACGCCACG GCCAATCGCT TTGTGCGCAC GGTGCTCATG CAGGCAGACA AGGAGGTCAA GGCATGGCAA CCCCAAGCCG GCATGCCCCT GTCGCTCTGA
|
Protein sequence | MLDYYQRELT WLRHAGGQFA ERYPKVARRL ELSPGECPDP HVERLLEGFA LLAARLQRRL DDDYAEFSDA LLEQLYPLAM RPLPSCAIVQ FEPDPSKGNL DGGYPLPRDT PLFVTTSKGE SIHFRTSAAV RLWPVEVSEA LLLGSDEAQA LTGVAQSRSA LRLSLRCLGD SQWSELGIEQ LRIHLAASPV VNANLYDLLG AHAVQVLAGS PGSIPARVKG LPKIVGFADD EVLLPDEDGV HPGMRLLAEY FAFPDKFHFF DLPLSGVSSD SQTLYLYIVF DRAPAGRLHL QATEIALGCA PVINLFPRTS EPLRPDGTRS EYRLIADSHR ENSVEIHSIR SMRASSASGV QRLPAYFGSQ HSSGDRQRYW HARRVNGQTP NRLGSDLLVS VVDTRFEPQT DLPDYSLTAE LLCTNRHLAQ SLPAGTPLGF ERPGPVAWAR LRNPPSPQSL PRLDGDSRWR LVSQLTLNHL SLVEGPQALD ALKEILTLHN LRDEASALRQ IEGLLNLGCE RVIGHVGADA WRGWRNGLEV QLQLDPQHFV GSSAVLFSAV LAQFFSVYAT ANRFVRTVLM QADKEVKAWQ PQAGMPLSL
|
| |