Gene Pfl01_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3390 
Symbol 
ID3713378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3866698 
End bp3867984 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content64% 
IMG OID 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_349119 
Protein GI77459612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGGT TATTTCTCGG GCTGTTTCTG GTGATGACCG TCGGGCTGGT GGCGGCGCTG 
CAAACCGTCG AACACACCTT CAACGCGTTG CTCGACAACC AGATGCAGGC CTACAACCGC
GAGGCGGTGC GCGGTCAGGC CTGGTCGCTG ATCGAACACA TGCGCGACCA GCAGGGCGCG
GCGCGCGAGG CCCAACTGGA GGCGTTGCGG CCGCACTACG GGTTGACGCT GAGCCTGGTC
GAGGCTGACC AATTGAACCT CAACGATCAG GAAAAAGCCG AACTGGCCCA GGATCTGCTG
GTGATTCGCG ATGACTACAC CCAGTTCATC AGCAACATCG ACGGTGGTTC GCAGTTGCTC
AGCATCAAAT TGCCGCCCGA GCCGAGCCTG ATGCCGTTCT ACATTGCCGG GGCCTACCTG
ATGCTGGCCG TGTTGCTCGG CATCGTCCTG TACTTCTGGG TGCGCCCGCA CTGGCGCGAT
CTGGAAAAAC TGCGGCTGGC CGCCGAGCGT TTCGGTGACA ACGACCTTTC GGTGCGGATC
CAGCTGTCCA AGCGCTCGAA CATCCGCGAC CTGGCCGGCC ACTTCAACCT GATGGCGGCG
CGCATCGAAG GCCTGATCGC CAATCAGCGC GAACTGACCA ACGCGGTCTC CCACGAACTG
CGCACGCCGA TTGCCCGGTT GTCGTTCGAG CTCGATCAGC TCAAGCAGCA ACCGGACGCC
AGCCAGAACC GCGAACTGAT CGCCGACATG TACGCCGACC TCGGCGAGCT GGAAGAAATG
GTCTCCGAAC TGCTGACCTA CGCCAGCCTC GAGCGCGGCG CGACGGTGAT CACCCGCGAA
AACATTCAGG CTGCCAACTG GCTCGACAGC GTGGTCGGCA GCGTGGCGCT GGAAGCCGAG
GCGGCCGGGG TGCAGCTGTT GATCGTAGAT TGCCGGGTCG ACGAAGTGCG GATCGAACCG
CGTTTCATGG CGCGTGCGGT GATCAATCTG CTGCGCAATG CCATCCGGTA TGCCGAGCAG
CGGGTCGAGG TGTCGCTGGT GCGCGTTGGC GATCAATACG AAGTGCAGGT CAACGACGAC
GGGCCGGGTG TGCCGCTGGC AGGGCGGGAG AAAATCTTCG AACCGTTCTC GCGTCTGGAC
GCCAGCCGTG ACCGCCGCAC GGGCGGCTTC GGCCTCGGCC TGGCGCTGGT GCGGCGGGTG
TCGCAATCCC ATGGCGGGCA GGTCGAGGTC GGCGACTCGC CGTGGGGCGG CGCTTCGTTC
CGCATGACCT GGGCGCATCT GGATTGA
 
Protein sequence
MLRLFLGLFL VMTVGLVAAL QTVEHTFNAL LDNQMQAYNR EAVRGQAWSL IEHMRDQQGA 
AREAQLEALR PHYGLTLSLV EADQLNLNDQ EKAELAQDLL VIRDDYTQFI SNIDGGSQLL
SIKLPPEPSL MPFYIAGAYL MLAVLLGIVL YFWVRPHWRD LEKLRLAAER FGDNDLSVRI
QLSKRSNIRD LAGHFNLMAA RIEGLIANQR ELTNAVSHEL RTPIARLSFE LDQLKQQPDA
SQNRELIADM YADLGELEEM VSELLTYASL ERGATVITRE NIQAANWLDS VVGSVALEAE
AAGVQLLIVD CRVDEVRIEP RFMARAVINL LRNAIRYAEQ RVEVSLVRVG DQYEVQVNDD
GPGVPLAGRE KIFEPFSRLD ASRDRRTGGF GLGLALVRRV SQSHGGQVEV GDSPWGGASF
RMTWAHLD