Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3303 |
Symbol | |
ID | 3713177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3784858 |
End bp | 3785595 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_349032 |
Protein GI | 77459525 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCACA TCAACCACAT CCTGATCGTC GACGATGACC GCGAGATCCG CGAACTGGTC GGCAATTACC TGACCAAGAA CGGCCTGCGC AGCACCGTGG TCGCCGATGG CCGGCAGATG CGCAGTTTTC TGGAAGCCAA CACGGTCGAC CTGATCGTGC TCGACATCAT GCTCCCCGGC GATGACGGGC TGGTGCTGTG CCGCGAATTG CGCGCCGGCA AACACAAGGC GATCCCGATC CTGATGCTCA CCGCCCGCGA CGACCAGACC GACCGCATCC TCGGCCTGGA AATGGGCGCC GACGACTACC TGACCAAACC CTTCGCCGCC CGCGAACTGC TGGCGCGGAT CAACGCCGTG CTGCGCCGTA CACGAATGCT GCCGCCCAAT CTGCTGATCA GCGAAACCGG GCGCCTGCTC GCGTTCGGCC GCTGGCGCCT GGACACCACC GCCCGCCACC TGCTCGATGA AGACGACACC ATGGTTGCCC TCAGCGGCGC CGAGTATCGC CTGCTCCGGG TGTTTCTCGA CCATCCGCAA CGGGTGCTCA GCCGCGACCA GTTGCTCAAT CTGACTCAGG GTCGCGACGC CGACCTGTTC GACCGCTCCA TCGATTTGCT GGTCAGTCGC CTGCGCCAGC GTCTGCTGGA CGACTCCCGC GAGCCGACTT ACATCAAGAC CGTGCGCAAC GAGGGTTATG TGTTCTCCTT CGCCGTGGAG ATGCTCGCCG AATCCTGA
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Protein sequence | MDHINHILIV DDDREIRELV GNYLTKNGLR STVVADGRQM RSFLEANTVD LIVLDIMLPG DDGLVLCREL RAGKHKAIPI LMLTARDDQT DRILGLEMGA DDYLTKPFAA RELLARINAV LRRTRMLPPN LLISETGRLL AFGRWRLDTT ARHLLDEDDT MVALSGAEYR LLRVFLDHPQ RVLSRDQLLN LTQGRDADLF DRSIDLLVSR LRQRLLDDSR EPTYIKTVRN EGYVFSFAVE MLAES
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