Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3278 |
Symbol | |
ID | 3713132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3761195 |
End bp | 3762025 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_349007 |
Protein GI | 77459500 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.28535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.153995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACCT GGCTGATTAC CGGAGCTTCC CGTGGTTTTG GCACCCTTAT CGCTGAACAG GCCCTGCGTG CCGGTGACGC GGTGATTGCC ACCGCCCGCA ACCCGCAAGA CATCACCGAC CGCCTCGGCG ATCACCCGAA CCTGCTGGCG GTGCGCCTGG ATGTCACCCG CGAAGAGGAA GCCCACCAAG CGGTGGCAGA AGGCATCAAG CGCTTCGGTC GCATCGACGT GCTGATCAAC AATGCCGGCT TCGGCGTGTT GGGCGCCGTC GAAGAAACCA GCGCCAGCGA AACCGAGCGC CTGTTCGCCA CCAACGTGTT CGGTCTGCTC AACGTCACCC GCGCCGTGCT GCCGCACATG CGCGCCCAGC GCAGTGGACG GGTCATCAAT ATCTCGTCGA TTGGCGGTTA TCAGGCCTAC GTGGGCTGGG GTGTCTACGG CTCGACCAAG TTCGCAGTGG AAGGCATCAG CGAAGCGCTG CATCAGGAAC TGGCGCCGCT GGGCATTCAT GCCACGGTGG TCGAACCGGG CTTCTTCCGC ACTGACTTCC TCGACGAACA GTCGCTGGTC AAGACCGCAT TGGTGCTGCC GGACTACGAC GAAACCGTCG GCAAGATGCG CACCTTTGCC GAAGCGGCCA ACCATGCGCA ACCGGGCGAT CCGCAGAAGT TTGCCGAAGC GATGCTGGCG CTGGTCAACG CACCGAACCC GCCGCAGCGT CTGGCGCTGG GCAGCGACAC GGTTGCACGA ATCGAGGCGA AGAACCGCTT GGTGGTGCAG GAATTGGCCG AGTGGAATGA GCTGGCGCTG TCCACGGATT TCAAGGACTG A
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Protein sequence | MRTWLITGAS RGFGTLIAEQ ALRAGDAVIA TARNPQDITD RLGDHPNLLA VRLDVTREEE AHQAVAEGIK RFGRIDVLIN NAGFGVLGAV EETSASETER LFATNVFGLL NVTRAVLPHM RAQRSGRVIN ISSIGGYQAY VGWGVYGSTK FAVEGISEAL HQELAPLGIH ATVVEPGFFR TDFLDEQSLV KTALVLPDYD ETVGKMRTFA EAANHAQPGD PQKFAEAMLA LVNAPNPPQR LALGSDTVAR IEAKNRLVVQ ELAEWNELAL STDFKD
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