Gene Pfl01_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3245 
Symbol 
ID3713080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3726036 
End bp3726827 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content59% 
IMG OID 
Productmethionine aminopeptidase, type I 
Protein accessionYP_348974 
Protein GI77459467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.292352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.873064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATC CGATCAAGAT CAACACCCAG GCCGAAATCG CCCAATCCCG AGAGGCCGGC 
AGACTGGCCG CCGAGGTGCT GGCAATGCTG GTGCCGCACG TCAAGGCTGG CGTCACCACC
GACCAGCTCG ACCAGTTGTG CAACGACTAC ATCGTCAATG TGCAGAAGGC GATTCCGGCC
AACGTCGGTT ATCACGGCTT TCCGAAAACC GTTTGTGCGT CAGTCAACGA AGTGGTCTGC
CACGGCATTC CTTCGAAGCG CGTGTTGAAG GATGGCGACA TCGTCAACCT CGACATCGCG
GTGATCAAGA ACGGCTGGTT CGGCGATACC AGCCGCATGT ACGTGGTCGG TGAGCCGACG
CCCGAGGCTC GGCACCTGAT CAAGACAACC TACGACGCGA TGTGCGCGGG CATCCGCGTC
GTCCGACCGG GCGCCACGTT GGGTGACATC GGTCATGCGA TCCAGACGTT GGCGGAAAAA
GAAGGGTTCA GCGTGGTGCG CGAGTATTGC GGGCACGGGA TTGGCAAGGT TTATCACGAT
GAGCCGCAGG TGCTGCATTA CGGTTATCCG GAGCAGGGCT TGAAGCTGAA GGCGGGGATG
ATTTTCACCA TCGAGCCGAT GCTCAATGCC GGCAAGCGGC ATGTGAAGAG TCTGGCGGAT
GGCTGGACGG TGGTGACCAA GGATCATTCA TTGTCGGCGC AGTGGGAGCA CATGATTGCG
GTGACTGACG ACGGGTTTGA AGTGTTGACG GCTTGGCCGG ATGAGATTGA GGGCTTTAAA
GCCATTGTCT GA
 
Protein sequence
MRNPIKINTQ AEIAQSREAG RLAAEVLAML VPHVKAGVTT DQLDQLCNDY IVNVQKAIPA 
NVGYHGFPKT VCASVNEVVC HGIPSKRVLK DGDIVNLDIA VIKNGWFGDT SRMYVVGEPT
PEARHLIKTT YDAMCAGIRV VRPGATLGDI GHAIQTLAEK EGFSVVREYC GHGIGKVYHD
EPQVLHYGYP EQGLKLKAGM IFTIEPMLNA GKRHVKSLAD GWTVVTKDHS LSAQWEHMIA
VTDDGFEVLT AWPDEIEGFK AIV