Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3201 |
Symbol | |
ID | 3713017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3676891 |
End bp | 3677331 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | alkylhydroperoxidase AhpD core |
Protein accession | YP_348930 |
Protein GI | 77459423 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.601606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00337027 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCACCGC GTCTGGATTA CTACAGCGCA TCACCCAAAG CCATGAAAGC GATGATTGGC CTGGAAGCGC TGACCAGCAA CCTGAGCATC GAACCGCCGC TGCTGCACCT GATCAAGATC CGCGCCTCGC AGCTCAACGG CTGCGCGTTC TGCACCGACA TGCATTCGGT GGAAGCGCGA CGGGCCGGGG AGACGGATCG GCGGCTGTAC GCCATCGCGG TCTGGCGCGA CAGCGGCTTC TTCAACCTGC GCGAGCGGGC GGCGCTGGCC TGGACCGAGG CGGTGACGCT GCTGGCGGAC AGCCGGGTGC CCGACGATGT TTACCAGCAG GCGCGGGAAC AGTTCAACGA GACGGAACTG GTGGACCTGA CCATTGCCGT CAGCACCATC AACAGCTGGA ATAGGCTGGC GGTGAGCTTC CGCCAGATTC CCAGCGATTG A
|
Protein sequence | MSPRLDYYSA SPKAMKAMIG LEALTSNLSI EPPLLHLIKI RASQLNGCAF CTDMHSVEAR RAGETDRRLY AIAVWRDSGF FNLRERAALA WTEAVTLLAD SRVPDDVYQQ AREQFNETEL VDLTIAVSTI NSWNRLAVSF RQIPSD
|
| |