Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3197 |
Symbol | |
ID | 3713013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3674110 |
End bp | 3675048 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | putative FecR |
Protein accession | YP_348926 |
Protein GI | 77459419 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0381932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0038104 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACATCT TCCGTCTGAC ACCTGCCGAG CCCACGCCTG CCGAGCGTCT GCAAAGCGAA GCCCGCGACT GGCTGATCCT GCTGACCTCC GGCCGCGCCA CGGTCGCCGA CGCCCGAGCG CTGCGCCAGT GGTGCGCGCA AAGCCCCGAA CACGCCCGCG CATTCGAAGA GTGCAAGGCC TTGTGGCACC TGCTGCAACC GGCAGCCGAA GCGATGCAGG CTCCACGACG GTTTGGACGA CGGGCCTTTC TCGGTGGCGC GATTGCCGCG TCGGCGGCGT TGCTGCTGGT GCGCGGCACG ATTCCGGGCG GGTTCTCCGG GCTCGGCGCG GATTACATCA CCGAAGTCGG CCAGCAACGC CGGGTCGAAC CGGCCGACGG CTTGAGCCTG GAACTGAACA CCCAGACCCG CATCAACCAG CGTTCGGTGG ATGAGGGCGT GCAGGGCTTT GAACTGGTCA GCGGAGAAGT CGAAGTGCAG ACCGCGCGAC TGCCGATGGC GATGCAGGCC GGTGGTGGTT GGTTGCGGGC GAGCAGGGCG CGGTTCAACT TGCGCAACCT CGATCAACAG GTGTGCGTGA CGTGCCTCGA TGGCGCGGTG GACGTGGAAG TTGAAGGCCG CAGCCTGCGC CTGGAGCCGG GCCAGCAATT GACCTACGAC GCGCAACAGG TCGGCACCAT GCAAAGCGTC GACACCGCAG CGGTGATGAA CTGGCGGCAG CAGGTGCTGG TGTTCAACGG CGCAACCCTG AGCCAGATGA TCGACGAGAT CAACCGCTAC CGCCCAGGCA TGTTACTGCT GCTCAACCGC GAACTCGGCC AACGCCGCGT ACAGGCACGT TTCTCCCTCG ACCAACTGGC CGGCGTTGGC GCGCTGATCC GCGATGCCTA CGGCGTCAAA TGCACCGAGC TACCGGGCGG CGTTGTAGTG CTCAGCTAA
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Protein sequence | MNIFRLTPAE PTPAERLQSE ARDWLILLTS GRATVADARA LRQWCAQSPE HARAFEECKA LWHLLQPAAE AMQAPRRFGR RAFLGGAIAA SAALLLVRGT IPGGFSGLGA DYITEVGQQR RVEPADGLSL ELNTQTRINQ RSVDEGVQGF ELVSGEVEVQ TARLPMAMQA GGGWLRASRA RFNLRNLDQQ VCVTCLDGAV DVEVEGRSLR LEPGQQLTYD AQQVGTMQSV DTAAVMNWRQ QVLVFNGATL SQMIDEINRY RPGMLLLLNR ELGQRRVQAR FSLDQLAGVG ALIRDAYGVK CTELPGGVVV LS
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