Gene Pfl01_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3197 
Symbol 
ID3713013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3674110 
End bp3675048 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative FecR 
Protein accessionYP_348926 
Protein GI77459419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0381932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0038104 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACATCT TCCGTCTGAC ACCTGCCGAG CCCACGCCTG CCGAGCGTCT GCAAAGCGAA 
GCCCGCGACT GGCTGATCCT GCTGACCTCC GGCCGCGCCA CGGTCGCCGA CGCCCGAGCG
CTGCGCCAGT GGTGCGCGCA AAGCCCCGAA CACGCCCGCG CATTCGAAGA GTGCAAGGCC
TTGTGGCACC TGCTGCAACC GGCAGCCGAA GCGATGCAGG CTCCACGACG GTTTGGACGA
CGGGCCTTTC TCGGTGGCGC GATTGCCGCG TCGGCGGCGT TGCTGCTGGT GCGCGGCACG
ATTCCGGGCG GGTTCTCCGG GCTCGGCGCG GATTACATCA CCGAAGTCGG CCAGCAACGC
CGGGTCGAAC CGGCCGACGG CTTGAGCCTG GAACTGAACA CCCAGACCCG CATCAACCAG
CGTTCGGTGG ATGAGGGCGT GCAGGGCTTT GAACTGGTCA GCGGAGAAGT CGAAGTGCAG
ACCGCGCGAC TGCCGATGGC GATGCAGGCC GGTGGTGGTT GGTTGCGGGC GAGCAGGGCG
CGGTTCAACT TGCGCAACCT CGATCAACAG GTGTGCGTGA CGTGCCTCGA TGGCGCGGTG
GACGTGGAAG TTGAAGGCCG CAGCCTGCGC CTGGAGCCGG GCCAGCAATT GACCTACGAC
GCGCAACAGG TCGGCACCAT GCAAAGCGTC GACACCGCAG CGGTGATGAA CTGGCGGCAG
CAGGTGCTGG TGTTCAACGG CGCAACCCTG AGCCAGATGA TCGACGAGAT CAACCGCTAC
CGCCCAGGCA TGTTACTGCT GCTCAACCGC GAACTCGGCC AACGCCGCGT ACAGGCACGT
TTCTCCCTCG ACCAACTGGC CGGCGTTGGC GCGCTGATCC GCGATGCCTA CGGCGTCAAA
TGCACCGAGC TACCGGGCGG CGTTGTAGTG CTCAGCTAA
 
Protein sequence
MNIFRLTPAE PTPAERLQSE ARDWLILLTS GRATVADARA LRQWCAQSPE HARAFEECKA 
LWHLLQPAAE AMQAPRRFGR RAFLGGAIAA SAALLLVRGT IPGGFSGLGA DYITEVGQQR
RVEPADGLSL ELNTQTRINQ RSVDEGVQGF ELVSGEVEVQ TARLPMAMQA GGGWLRASRA
RFNLRNLDQQ VCVTCLDGAV DVEVEGRSLR LEPGQQLTYD AQQVGTMQSV DTAAVMNWRQ
QVLVFNGATL SQMIDEINRY RPGMLLLLNR ELGQRRVQAR FSLDQLAGVG ALIRDAYGVK
CTELPGGVVV LS