| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3188 |
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| Symbol | |
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| ID | 3712987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 3666752 |
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| End bp | 3667474 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | animal peptidoglycan recognition protein PGRP |
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| Protein accession | YP_348917 |
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| Protein GI | 77459410 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000281584 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0104893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGCCA GTTTTGCGAC ACAGGCAACT GCTCAGGAGA TTAAGCCAGG CGAGTTCATG
TGCCCTATAC CGGTGGCTGT TAATGATCGA GCGGCTACTC GCGAGGCGAT CATCAAACGG
GTTCGGGATT TGAAGGTCAC GTTTGTCGAG CGCTCCTCCT GGAAAGCGTT GGATGGCAAG
AAGGACATGG TCAAGGATTG GGACTACACC ATGATTGCTT TGCACCACGC GGGCCGCAGC
CATAGCTGCA CTCCCGGTGC GGAGCAGATG CAAGAAATCC AGAAAGGACA CCTGAGTCAG
AAGTACGACG ATATTGGCTA CCACTACGGC ATTGATTGCA CGGGGCAGGT TTTTGAAGGT
CGTGACATTC GGCTTCAGGG CTCAAGTGTT CTGAAATACA ACACAGGGCT GATTGGCATC
GTTCTGCTGG AAAACCTGAC GACACCGGAG GAGGGTGGCG ATTGGGTCGC CAAAGGTCGG
GTGGCTCTGG ATAGCATCGG TTACAGCACC ACAAACGTTA TTCCCAAAGA GCAAATCGTT
TCTCTGATGC ACCTGATCGA CGCATTGAAA AGCGTTTTTT TTATCAAGAA TTTTGGTGGC
CACCGGGAAT ATCCAGGGCA AGGCTCTGAA GGGAAAATTT GCCCCGGCAA CATTGGAATG
GAGCTGGTCA GAAATATCAG AGCTCAAACC CAACTGCTTC CACCGCCGGC GCCACAGCAA
TGA
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| Protein sequence | MAASFATQAT AQEIKPGEFM CPIPVAVNDR AATREAIIKR VRDLKVTFVE RSSWKALDGK
KDMVKDWDYT MIALHHAGRS HSCTPGAEQM QEIQKGHLSQ KYDDIGYHYG IDCTGQVFEG
RDIRLQGSSV LKYNTGLIGI VLLENLTTPE EGGDWVAKGR VALDSIGYST TNVIPKEQIV
SLMHLIDALK SVFFIKNFGG HREYPGQGSE GKICPGNIGM ELVRNIRAQT QLLPPPAPQQ
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