Gene Pfl01_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3141 
Symbol 
ID3712866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3606683 
End bp3607372 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content60% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_348870 
Protein GI77459363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.167888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA AAAAACCGGA AACCACGGTC GACCGCGTCT ACCAAGGGGT TTACGAGGCG 
ATCAGCAAAC GTTCGCTGCG TCCGGGGATG AAGCTGGGCG AGGCGTCGCT GGCAGAATTG
TTCAATGTCA GCCGCACGTC GGTTCGTGCC GCGCTCAAGC AACTGGAGGC CGATGGACTG
GTCACCACCG AGCCCAATAA AGGTGCATCG GTATCGCTGC CCAGTGATGA AGAGATCCGT
TCGCTGTTCG AAACCCGACG TCTGGTCGAG ATCGGCATCG TCACCGAACT GTGCCGACGC
AAAGACTCTG CGGCGATGCA GGACCTGCGC GATCACTTGC TGCTGGAAGA CGAAGCCCAC
GAAGCCGGCG ACCACGAGCG ACTGATTCAC CTGCTGGGCG AGTTCCACAT CAAGCTCGCC
CGCAGCCTGA ATAACCCGGT GCTGCTCGAC TGGTTCCAGA AGCTGATTTC CCGCGCCTCG
CTGTACGCCG CGGCGCTGGA TGACGACAGC CACGAAGCCT GTCGCGACGA CGAACACCTG
CGCCTGATCG AGTACATCGA GGCTGGCAAT CAGAGCGCCG CCATCGAGCT GACCTGCATA
CACCTGGACG GCATCCAGAA GGCGATTCTC GACGTCGCTG CGAAGCTCAA GACCGGCTAC
CATCCGCTCA AGCATCTGAT CGAAGTCTGA
 
Protein sequence
MTEKKPETTV DRVYQGVYEA ISKRSLRPGM KLGEASLAEL FNVSRTSVRA ALKQLEADGL 
VTTEPNKGAS VSLPSDEEIR SLFETRRLVE IGIVTELCRR KDSAAMQDLR DHLLLEDEAH
EAGDHERLIH LLGEFHIKLA RSLNNPVLLD WFQKLISRAS LYAAALDDDS HEACRDDEHL
RLIEYIEAGN QSAAIELTCI HLDGIQKAIL DVAAKLKTGY HPLKHLIEV