Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3141 |
Symbol | |
ID | 3712866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3606683 |
End bp | 3607372 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_348870 |
Protein GI | 77459363 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.167888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA AAAAACCGGA AACCACGGTC GACCGCGTCT ACCAAGGGGT TTACGAGGCG ATCAGCAAAC GTTCGCTGCG TCCGGGGATG AAGCTGGGCG AGGCGTCGCT GGCAGAATTG TTCAATGTCA GCCGCACGTC GGTTCGTGCC GCGCTCAAGC AACTGGAGGC CGATGGACTG GTCACCACCG AGCCCAATAA AGGTGCATCG GTATCGCTGC CCAGTGATGA AGAGATCCGT TCGCTGTTCG AAACCCGACG TCTGGTCGAG ATCGGCATCG TCACCGAACT GTGCCGACGC AAAGACTCTG CGGCGATGCA GGACCTGCGC GATCACTTGC TGCTGGAAGA CGAAGCCCAC GAAGCCGGCG ACCACGAGCG ACTGATTCAC CTGCTGGGCG AGTTCCACAT CAAGCTCGCC CGCAGCCTGA ATAACCCGGT GCTGCTCGAC TGGTTCCAGA AGCTGATTTC CCGCGCCTCG CTGTACGCCG CGGCGCTGGA TGACGACAGC CACGAAGCCT GTCGCGACGA CGAACACCTG CGCCTGATCG AGTACATCGA GGCTGGCAAT CAGAGCGCCG CCATCGAGCT GACCTGCATA CACCTGGACG GCATCCAGAA GGCGATTCTC GACGTCGCTG CGAAGCTCAA GACCGGCTAC CATCCGCTCA AGCATCTGAT CGAAGTCTGA
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Protein sequence | MTEKKPETTV DRVYQGVYEA ISKRSLRPGM KLGEASLAEL FNVSRTSVRA ALKQLEADGL VTTEPNKGAS VSLPSDEEIR SLFETRRLVE IGIVTELCRR KDSAAMQDLR DHLLLEDEAH EAGDHERLIH LLGEFHIKLA RSLNNPVLLD WFQKLISRAS LYAAALDDDS HEACRDDEHL RLIEYIEAGN QSAAIELTCI HLDGIQKAIL DVAAKLKTGY HPLKHLIEV
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