Gene Pfl01_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3125 
Symbol 
ID3712812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3587975 
End bp3588922 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content63% 
IMG OID 
Productputative FecR 
Protein accessionYP_348854 
Protein GI77459347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.25811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCGG ACGAAACGCT GATCGACGAA GCGGCGCAAT GGATGGCGCT GCTGCAATCG 
GGGCACGTCA GCCTGCAGGA GCGCGCCGCC TTCGACGCCT GGCGCACGGC GGATTCACGG
CATCAGCAGA TCATCGAACA AATGGGTGGC GGGCTGAACC TGTTGCGTCA TGCGAACCTG
CGCGGCTTGC CGCGTGAGAG TGTGTTGCAC AGCCTGAATG CGCCGTCCAG TCGCCGTCGA
TTCCTCAGCG GCAGTTTGAG CGTTCTCGGT ATCGCGGTGC TGGCCGGTTT GCTCGGTCGA
CGTTATGGCT GGTTGCCCGA GGCCGGCGAG TTGTCGACCG GTACCGGCGA GCGTCGGGAA
TTCACGCTGG CGGATGGCAG CGCTCTGACC CTCAATGCCC GCAGCCGTGT GGTACCACGC
TTCAACAACA TCGAGCGTTT GCTGGACTTG CGCAGCGGTG AACTGCTGAT CGATGTGGCG
AAAAATCTTG CCCGGCCGTT TGTGGTCGAA ACCGAGCATG GGCGGATGCG TGCGCTCGGG
ACCAAATTCC TGGTGCAGCG CGGTGAGGAT TCGACTCGGC TGGTGATGTT GCATTCGCAA
GTCGAAGTGG TCACCGCCAG CGGCGCGCGG CAAGTGGTGG AGGCGGGCGA AAGTCTGCTG
TTCAACGCTC AGGAAATCCT CGCGCTGGAA CCCGGCAACG GGCAGGAAAG TGCCTGGGTC
CAAGGGCGGC TTGAAGTGCG CGATCGCCCC TTGAGCGAAG TCATCGACAG CCTGCGCAGC
TACCGTCGAG GCATCCTGCA CTTGAGCCCG GAGGTTGCCG GTCTGCGTCT CAGCGGTCTC
TATCCACTGG ACGATAGCGA CCGCACCCTG CAACTGCTGG AGCGTTCGCT GCCGATCCGT
GTCACCTGGC ACAACCCGTA CTGGGTCAGC ATTGAAGCGC GGTTATAA
 
Protein sequence
MRPDETLIDE AAQWMALLQS GHVSLQERAA FDAWRTADSR HQQIIEQMGG GLNLLRHANL 
RGLPRESVLH SLNAPSSRRR FLSGSLSVLG IAVLAGLLGR RYGWLPEAGE LSTGTGERRE
FTLADGSALT LNARSRVVPR FNNIERLLDL RSGELLIDVA KNLARPFVVE TEHGRMRALG
TKFLVQRGED STRLVMLHSQ VEVVTASGAR QVVEAGESLL FNAQEILALE PGNGQESAWV
QGRLEVRDRP LSEVIDSLRS YRRGILHLSP EVAGLRLSGL YPLDDSDRTL QLLERSLPIR
VTWHNPYWVS IEARL