Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3125 |
Symbol | |
ID | 3712812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3587975 |
End bp | 3588922 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | putative FecR |
Protein accession | YP_348854 |
Protein GI | 77459347 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.25811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCCGG ACGAAACGCT GATCGACGAA GCGGCGCAAT GGATGGCGCT GCTGCAATCG GGGCACGTCA GCCTGCAGGA GCGCGCCGCC TTCGACGCCT GGCGCACGGC GGATTCACGG CATCAGCAGA TCATCGAACA AATGGGTGGC GGGCTGAACC TGTTGCGTCA TGCGAACCTG CGCGGCTTGC CGCGTGAGAG TGTGTTGCAC AGCCTGAATG CGCCGTCCAG TCGCCGTCGA TTCCTCAGCG GCAGTTTGAG CGTTCTCGGT ATCGCGGTGC TGGCCGGTTT GCTCGGTCGA CGTTATGGCT GGTTGCCCGA GGCCGGCGAG TTGTCGACCG GTACCGGCGA GCGTCGGGAA TTCACGCTGG CGGATGGCAG CGCTCTGACC CTCAATGCCC GCAGCCGTGT GGTACCACGC TTCAACAACA TCGAGCGTTT GCTGGACTTG CGCAGCGGTG AACTGCTGAT CGATGTGGCG AAAAATCTTG CCCGGCCGTT TGTGGTCGAA ACCGAGCATG GGCGGATGCG TGCGCTCGGG ACCAAATTCC TGGTGCAGCG CGGTGAGGAT TCGACTCGGC TGGTGATGTT GCATTCGCAA GTCGAAGTGG TCACCGCCAG CGGCGCGCGG CAAGTGGTGG AGGCGGGCGA AAGTCTGCTG TTCAACGCTC AGGAAATCCT CGCGCTGGAA CCCGGCAACG GGCAGGAAAG TGCCTGGGTC CAAGGGCGGC TTGAAGTGCG CGATCGCCCC TTGAGCGAAG TCATCGACAG CCTGCGCAGC TACCGTCGAG GCATCCTGCA CTTGAGCCCG GAGGTTGCCG GTCTGCGTCT CAGCGGTCTC TATCCACTGG ACGATAGCGA CCGCACCCTG CAACTGCTGG AGCGTTCGCT GCCGATCCGT GTCACCTGGC ACAACCCGTA CTGGGTCAGC ATTGAAGCGC GGTTATAA
|
Protein sequence | MRPDETLIDE AAQWMALLQS GHVSLQERAA FDAWRTADSR HQQIIEQMGG GLNLLRHANL RGLPRESVLH SLNAPSSRRR FLSGSLSVLG IAVLAGLLGR RYGWLPEAGE LSTGTGERRE FTLADGSALT LNARSRVVPR FNNIERLLDL RSGELLIDVA KNLARPFVVE TEHGRMRALG TKFLVQRGED STRLVMLHSQ VEVVTASGAR QVVEAGESLL FNAQEILALE PGNGQESAWV QGRLEVRDRP LSEVIDSLRS YRRGILHLSP EVAGLRLSGL YPLDDSDRTL QLLERSLPIR VTWHNPYWVS IEARL
|
| |