Gene Pfl01_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3079 
Symbol 
ID3712766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3523882 
End bp3524655 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content64% 
IMG OID 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_348808 
Protein GI77459301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTC TTTCTGGCAA GACCGCACTG GTTACCGGCT CCACCAGCGG AATCGGGCTG 
GGCATCGCCC TGACGCTGGC CAAGGCTGGC GCCAACCTGA TCCTAAACGG CTTTGGCGAC
GCCTCCAAGG TGATCGCCGA AGTCGAGCAG TTCGGCGGCA AGGTCGGCCA TCACCCGGCG
GACGTCAGCG ATCCCGCCCA GATCGCCGAC ATGATTGCCT ACGCCGAACG CGAGTTCGGC
GGCGTGGACA TTCTGGTCAA CAACGCCGGC ATCCAGCACG TCGCGGCGGT GGAAGAATTT
CCGGTGGAGC GCTGGGATTC GATCATCGCG ATCAACCTGT CGTCGGTGTT TCACAGCACT
CGCCTGAGTT TGCCGGGCAT GCGCGCCAAG GGCTGGGGGC GAATCGTCAA CATCGCCTCG
GTGCATGGTC TGGTCGGTTC CACCGGCAAA GCCGCGTACG TGGCAGCCAA GCATGGGGTG
ATCGGCTTGA CCAAAGTGGT CGGCCTGGAA ACCGCCGCCA GCAACGTCAC CTGCAACGCC
ATCTGCCCGG GCTGGGTGCT GACGCCGCTG GTGCAGAAGC AGATCGATGA TCGCGCAGCC
AAGGGTGTCG ACCCGCAGCA GGCGCAACAC GATCTGCTGG CCGAAAAGCA GCCGTCGCTG
GAGTTCGTCA CGCCGGCGCA TCTGGGTGAA CTGGTGCTGT TCCTGTGCAG CGAGGCCGGC
AGCCAGGTGC GTGGCGCCGC GTGGAATATC GATGGCGGGT GGCTCGCGCA GTAA
 
Protein sequence
MTTLSGKTAL VTGSTSGIGL GIALTLAKAG ANLILNGFGD ASKVIAEVEQ FGGKVGHHPA 
DVSDPAQIAD MIAYAEREFG GVDILVNNAG IQHVAAVEEF PVERWDSIIA INLSSVFHST
RLSLPGMRAK GWGRIVNIAS VHGLVGSTGK AAYVAAKHGV IGLTKVVGLE TAASNVTCNA
ICPGWVLTPL VQKQIDDRAA KGVDPQQAQH DLLAEKQPSL EFVTPAHLGE LVLFLCSEAG
SQVRGAAWNI DGGWLAQ