Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3079 |
Symbol | |
ID | 3712766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3523882 |
End bp | 3524655 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_348808 |
Protein GI | 77459301 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACTC TTTCTGGCAA GACCGCACTG GTTACCGGCT CCACCAGCGG AATCGGGCTG GGCATCGCCC TGACGCTGGC CAAGGCTGGC GCCAACCTGA TCCTAAACGG CTTTGGCGAC GCCTCCAAGG TGATCGCCGA AGTCGAGCAG TTCGGCGGCA AGGTCGGCCA TCACCCGGCG GACGTCAGCG ATCCCGCCCA GATCGCCGAC ATGATTGCCT ACGCCGAACG CGAGTTCGGC GGCGTGGACA TTCTGGTCAA CAACGCCGGC ATCCAGCACG TCGCGGCGGT GGAAGAATTT CCGGTGGAGC GCTGGGATTC GATCATCGCG ATCAACCTGT CGTCGGTGTT TCACAGCACT CGCCTGAGTT TGCCGGGCAT GCGCGCCAAG GGCTGGGGGC GAATCGTCAA CATCGCCTCG GTGCATGGTC TGGTCGGTTC CACCGGCAAA GCCGCGTACG TGGCAGCCAA GCATGGGGTG ATCGGCTTGA CCAAAGTGGT CGGCCTGGAA ACCGCCGCCA GCAACGTCAC CTGCAACGCC ATCTGCCCGG GCTGGGTGCT GACGCCGCTG GTGCAGAAGC AGATCGATGA TCGCGCAGCC AAGGGTGTCG ACCCGCAGCA GGCGCAACAC GATCTGCTGG CCGAAAAGCA GCCGTCGCTG GAGTTCGTCA CGCCGGCGCA TCTGGGTGAA CTGGTGCTGT TCCTGTGCAG CGAGGCCGGC AGCCAGGTGC GTGGCGCCGC GTGGAATATC GATGGCGGGT GGCTCGCGCA GTAA
|
Protein sequence | MTTLSGKTAL VTGSTSGIGL GIALTLAKAG ANLILNGFGD ASKVIAEVEQ FGGKVGHHPA DVSDPAQIAD MIAYAEREFG GVDILVNNAG IQHVAAVEEF PVERWDSIIA INLSSVFHST RLSLPGMRAK GWGRIVNIAS VHGLVGSTGK AAYVAAKHGV IGLTKVVGLE TAASNVTCNA ICPGWVLTPL VQKQIDDRAA KGVDPQQAQH DLLAEKQPSL EFVTPAHLGE LVLFLCSEAG SQVRGAAWNI DGGWLAQ
|
| |