Gene Pfl01_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3005 
Symbol 
ID3712167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3446366 
End bp3446860 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content56% 
IMG OID 
ProductDNA repair protein RadC 
Protein accessionYP_348734 
Protein GI77459227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.329509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC AACTCACACT GATTGAGACC TCGGATTTCG AGGCTGATCG CATTGTCCAA 
GAAAACCAGC TGATCGACGA AGCGCTGCAT ATTCTGGATC GTCGGCTGTT CGCCCGCGGC
CCTATCCTGA CGTCGCCTGA CACTGTGGCC TCATACCTAA AACTGCACCT TGCGCAACAA
GAGCATGAAG TCTTCGGTGT GATCTTTCTC GATGCCAGGC ACCGGGTGCT GGCATTCGAA
GTCCTCTTTC ACGGCAGCAT TGATGGCGCC AGCGTTTACC CCCGCCAAGT CGTTAAGCGT
TCCCTCGCGC ATAACGCTGC GGCCACCATT TTTGTTCACA ACCACCCCTC AGGGTGTACG
GAACCCAGCC AGGCGGATCG CGTCTTGACT GCACGACTGA AGGAGGCCTT GGCCTTGATC
GAAGTGCGTG TACTGGATCA CTTTATCGTG GGTGAAGGTC GTCCTCTCTC CCTTGCCGAA
CATGGCTGGC TTTAA
 
Protein sequence
MSTQLTLIET SDFEADRIVQ ENQLIDEALH ILDRRLFARG PILTSPDTVA SYLKLHLAQQ 
EHEVFGVIFL DARHRVLAFE VLFHGSIDGA SVYPRQVVKR SLAHNAAATI FVHNHPSGCT
EPSQADRVLT ARLKEALALI EVRVLDHFIV GEGRPLSLAE HGWL