Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2998 |
Symbol | |
ID | 3712160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3440461 |
End bp | 3441279 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348727 |
Protein GI | 77459220 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00986967 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTGCCC TTAACCCTCA TCTGTCGCAA CGTTTCCGTC CAAGCCTATG CGAGGACAAC ACCGTGGCCG ATCACTATCA ACTCAACCTG GGTTCACTGC GCAGCAGCAT CACCCTGACC CTGCACACCC ACCACGCCGC CCGCATCTGG CAAGGTCGGG CCGCACGTGA AGGCGTCCAC TCGATCATGG GCATGGCCGG CTACATCAGT GTCACCAACC TGATCAAACA AACTGCGGCC CAGGATGATC CCTATGCCGA CTGGGCCATC GTGCAACTCG AAGAAAAACT GATGCAGGCA AAAGCGGGGA TGCTGGAACT GACCCAACAG CTGGACCGAA TCAGACAAGA TCTGCCGACA CAGATCGACA TGAGCGACAA CCTCAACATC CACCCCGTCA CCTTGCCGTT GTACATCAGC AGCCAGCTGG GTTTTCTGGC GGTCTACCTG CTGACCGACT ACGACACTCT TGTACGCCGA GCCCTGTTGT CTCATCACAC CGCCTTGATC GGTCGCAGGG ACATGGAAGC CTGGATCGAT GACGGCGCCC ATCTGCTGCG CAGCCTATTT GGCCAGGCCC AGCGTTATCG GCATGCCGGC GTCACGCGTG ATGACATGGC GGCGAACAAC GCCCGTGCCA TTGCGGCCAT CGAGAAGATG GGTTTGCCTC CGATGGACAT CCTGGAGGGG CATCGCCGCT CCCAGTTCGC GCCGCCAATC ACTCGCCGTG ATGCGGTGGC AGTGGATGAC GCCGAAGCGT TGGCAGAGGA CGTGGTAGCG TCGTCTGCGA CAGTGAGTAA GCCGGAGGAC GACGCATGA
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Protein sequence | MAALNPHLSQ RFRPSLCEDN TVADHYQLNL GSLRSSITLT LHTHHAARIW QGRAAREGVH SIMGMAGYIS VTNLIKQTAA QDDPYADWAI VQLEEKLMQA KAGMLELTQQ LDRIRQDLPT QIDMSDNLNI HPVTLPLYIS SQLGFLAVYL LTDYDTLVRR ALLSHHTALI GRRDMEAWID DGAHLLRSLF GQAQRYRHAG VTRDDMAANN ARAIAAIEKM GLPPMDILEG HRRSQFAPPI TRRDAVAVDD AEALAEDVVA SSATVSKPED DA
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