Gene Pfl01_2990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2990 
Symbol 
ID3712152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3432641 
End bp3433603 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content44% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_348719 
Protein GI77459212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCCA AATCCATACA ATTCATCACC TATCCGGAAT TAAGTTTGCT TGATTTGGCG 
GGCCCCCTCG AAGTGTTCAT GACAGCTAAC CGATTTTCCC GCTTTGATCA TAAACCATAT
ACAATTTCTA TTTTAGCGTT AAACCAGACC ACTGAGCCAT GCTCCAATTT TTCAATACAT
ACTGAAACTC TGCGAGCAGA AACCCCTTCT CCGCACACCT TAATCATACC CGGCGGACCC
GGTATACATA ATTTCTACAA AGACCCGAAG TTCACCACAC ATTTTATACA TCATGCAGAC
AAAGCCAAGC GCTTGATTTC TGTTTGCACT GGCATATTCG CGCTAGCTTA TGCTGGAAAA
CTGGACGGAA GAAAAGCAAC CACTCACTGG TCCGCGTACG ACGATTTGGA GAGAAGCTTT
CCTTCAATAA TAGTTAAGCG CGGCCCTATA TTTATTAATG ATGAACACAT ATGGACGTCT
GCAGGCGTCA CATCAGGTAT TGACTTAGCG TTAGCTATCG TTGAGGAGGA TCTAGGATAC
ACCGTTGCAC TAGAGGTTGC TCGACATCTG GTAATGTTTC TCAAACGCCC GGGCGATCAG
AATCAATTCA GCTCTGCTTT GAATTTGCAA TCGAAGAGTA GCCAGTTCTC AGACTTGCAT
GCATGGATTA ATGAAAATCT AGGCACCGAC TTAACAGTGC CCGCGCTCGC AAACTTCATG
AACATGAGCG AAAGAACATT TATACGTAAG TACTCAGAAT CCATGAGTAG AACGCCAAGC
AAAACGGTAG AGCTCCTCCG ATTAGACGCT GCTCGCGATA TGCTTACAAC CTCAAAAAAA
CCTCTAAAGA CTATAGCCAA GCACTGCGGA CTGGGTAGTG AATCGACACT AATTAGAAGA
TTTTTGAAAA AATTTGGCAC CACACCAAAA GAGTATCGCG CGCGCTTCAA ATCGAACCAA
TAA
 
Protein sequence
MRSKSIQFIT YPELSLLDLA GPLEVFMTAN RFSRFDHKPY TISILALNQT TEPCSNFSIH 
TETLRAETPS PHTLIIPGGP GIHNFYKDPK FTTHFIHHAD KAKRLISVCT GIFALAYAGK
LDGRKATTHW SAYDDLERSF PSIIVKRGPI FINDEHIWTS AGVTSGIDLA LAIVEEDLGY
TVALEVARHL VMFLKRPGDQ NQFSSALNLQ SKSSQFSDLH AWINENLGTD LTVPALANFM
NMSERTFIRK YSESMSRTPS KTVELLRLDA ARDMLTTSKK PLKTIAKHCG LGSESTLIRR
FLKKFGTTPK EYRARFKSNQ