Gene Pfl01_2987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2987 
Symbol 
ID3712150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3430139 
End bp3431113 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content54% 
IMG OID 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_348717 
Protein GI77459210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGA TTTATGTGAC TAGCCCGATC CATCCAGAAG TACTACAGGC CCTTTCGTCG 
GTGGGCGAAG TTCGACTCGG CTATGGCCCA AATGCTGCGC CTTACTCGGA AATTCAAAAC
GAGGTAGACG CGGTATTTTT ACGCGGCGGC CATATCTCCG CCGAAATGAT CGCGGCCTCA
CCTAAGCTTC GCATCGTAGC TCGTCATGGT GCGGGGTACG ACAACGTCGA CTACAAAGCA
GCAGCAGAGC TGGGGGTCTG GGTAACCAAT ACGCCTGGCG CGAACAGAAG AAGTGTTGTG
GAGCATGTAT TTGCTCTGCT GCTGGGCATT AGCCGCAAGG TTCAACTGGC AACAGATCAA
ACCCGTAACA ATATATGGGC GCAAGATCGA CTGTCGCTTA CAGGAATCGA GCTCGAAGGG
CGCACCTTGG GCCTGATTGG GTTCGGCGAC ATTGGTCGGC ATGTTGCGCC AGTTGCTGAA
GCTTTCGGAA TGAAGGTTCT GGCGACTGAT CCTGCTTATG ACACGAGTTT TGATAAGCGT
TTGGTAGATC TCGACACGTT GTTGACCCAA GCAGACGTCG TGAGCCTCCA CGTGCCTCTG
CAGGAAGGCA CCGAGAACCT GATCAGCAGA GCCGAAATCG AGAAGATGAA AACCGGCGCT
ATCTTGATCA ACACCAGTCG CGGTGGAGTG ATCGATGAAG CAGCTGTTGC TGATGCCTTG
CGTAGCGGCA AGCTGGGTGG CGCGGGTATC GACGTTCTAG CTGCAGAAAA CACGGATATG
ATCACCCCAT TCAGTTACAA CACATTCCCT GTTGCTGACC TTCCGAACCT ACTCGTCACT
CCCCACGTTG CCGGGCAAAC AAATGAATCA CTACTTCGGG TTGGCATGAG CGCAGTAAAG
GCTATTTCTG CTGTCTTGCG CGGCGCCCCC CCGCTCCACC CAGTCAACAA CCCCGTACCT
AAAACATTTA ACTAA
 
Protein sequence
MSLIYVTSPI HPEVLQALSS VGEVRLGYGP NAAPYSEIQN EVDAVFLRGG HISAEMIAAS 
PKLRIVARHG AGYDNVDYKA AAELGVWVTN TPGANRRSVV EHVFALLLGI SRKVQLATDQ
TRNNIWAQDR LSLTGIELEG RTLGLIGFGD IGRHVAPVAE AFGMKVLATD PAYDTSFDKR
LVDLDTLLTQ ADVVSLHVPL QEGTENLISR AEIEKMKTGA ILINTSRGGV IDEAAVADAL
RSGKLGGAGI DVLAAENTDM ITPFSYNTFP VADLPNLLVT PHVAGQTNES LLRVGMSAVK
AISAVLRGAP PLHPVNNPVP KTFN