Gene Pfl01_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2907 
Symbol 
ID3712671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3351191 
End bp3352816 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content62% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_348638 
Protein GI77459132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.300582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGC GTAATCTGAA TATCGCGCCC CGTGCCTTCC TCGGTTTTGC CTTTATTGCC 
TTGCTGGTGA TTGTGCTCGG CGTGTTCGCC GTCAACCGCA TGTCGATCAT CCGTCAGGCT
TCCCTGGAGA TGGACTCTAC GCAGTTGCCA AGCGTCACCC AACTCGCGGT GGTGACGGAG
AACGTGCTGC GCCTGCGGAT TCTCTCGTTC CGCATTCTGG TCAACCGCGA CCCGGCCGGT
TTGCAGGAAG CCCAGACCCG CATCGGTGTG CTGGTGGACA AGGTGCGCAC TGCTCAGGCC
AGTTACGCGG CATTGCCGGC CGGTCCGCAA GAGCGCGCGT TATATCAGGA GTTCTCGACG
ACCCTCGACA ACTACGTGCA GGCGCAAAAC CAGATGATGG AGCTGTCGCG CCAGGACAAA
CTCGACGAGA TGCGCGCCCT GATCAATACG AAGATCAAGG ACGGCACCGA CAAGATGGGC
GAACAACTCA ACAAGCTGAT CGCGATCAAC GCCGCCGACG CGAAGACCGC TTCCACTCAG
GCGGGTGAGT ATTACAACAG TGCCATTACC GGCATCATCG CCGTGTCTGT GATTGCCGCG
TTGTTGACCG TATTGCTGGC CTGGCTGCTG ACCCGCAGCA TCGTCACGCC GCTGAACCGC
GCCGTCGCTG CCGCGCAAAC CATCGCTGGC GGCAACCTGA CCAAAGCCAT CGAAGTCGAC
GGCAAGGACG AGCCGGCGCG CCTGCTTGAA GCCTTGGCCG CGATGCAGAC CAACCTGCGC
AAGACCATCG AGCAGATTGC CGGCTCCGCC ACCCAACTGG GCGCCGCCGC CGAAGAACTC
AGCGCGGTGA TCGAAGAGGC CTCCCGTGGC CTGCAACAGC AGAACGATGA AATCGAACAG
GCCGCCACCG CCGTCAACGA AATGACCGCT GCGGTGGAAG AGGTGGCACG CAACGCAGTG
TCGACCTCCG AAGCCTCGAA CCAGTCGACC CACGCCGCCC GTGAAGGTCG CGATCAGGTG
GTGAAAACCG TCGACGCGAT CCAGACCATG ACCCACGACG TGCAAAACAC CGCGCAAATG
ATCGAAGGCC TGGCCGCTCA GGGCCGCGAC ATCGGCAAAG TGCTGGACGT GATCCGCGCC
ATCGCCGAAC AGACCAACCT GCTGGCGCTC AACGCCGCCA TCGAAGCAGC CCGTGCCGGT
GAAGCGGGAC GTGGTTTTGC CGTGGTAGCG GATGAAGTTC GCGCCCTGGC CCATCGCACC
GCGCAATCGA CCCAGGAGAT CGAAAAAATG GTCGCCGGCA TTCAGAACGG CACCGGTGAA
GCAGTCGAGT CGATGCAGCA AAGTAACCAG CGCACCCAGA CCACCCTGGA AATGGCCCGC
GCCGCCGGCG TCGCACTGGA GCAGATCACT CAATCGATTC ACCAGATCAA CGAGCGCAAC
CTGGTGATCG CCAGCGCCTC GGAAGAGCAG GCGCAGGTGT CCCGTGAGGT CGACCGCAAC
CTGGTCAACA TCCGCGACCT GGCCACTCAA TCGGCCGCCG GCGCGAATCA AACCAGCGCC
GCGACTCACG AACTGTCGCG CCTGGCGGTG GATTTGAATG CGATGGTGGC GCGCTTTGTG
ATTTGA
 
Protein sequence
MSLRNLNIAP RAFLGFAFIA LLVIVLGVFA VNRMSIIRQA SLEMDSTQLP SVTQLAVVTE 
NVLRLRILSF RILVNRDPAG LQEAQTRIGV LVDKVRTAQA SYAALPAGPQ ERALYQEFST
TLDNYVQAQN QMMELSRQDK LDEMRALINT KIKDGTDKMG EQLNKLIAIN AADAKTASTQ
AGEYYNSAIT GIIAVSVIAA LLTVLLAWLL TRSIVTPLNR AVAAAQTIAG GNLTKAIEVD
GKDEPARLLE ALAAMQTNLR KTIEQIAGSA TQLGAAAEEL SAVIEEASRG LQQQNDEIEQ
AATAVNEMTA AVEEVARNAV STSEASNQST HAAREGRDQV VKTVDAIQTM THDVQNTAQM
IEGLAAQGRD IGKVLDVIRA IAEQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRALAHRT
AQSTQEIEKM VAGIQNGTGE AVESMQQSNQ RTQTTLEMAR AAGVALEQIT QSIHQINERN
LVIASASEEQ AQVSREVDRN LVNIRDLATQ SAAGANQTSA ATHELSRLAV DLNAMVARFV
I