Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2853 |
Symbol | |
ID | 3712173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3291590 |
End bp | 3292468 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_348584 |
Protein GI | 77459078 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA CTCAGGCAGA ACGACTCCAG GCGGAGCGCA AACTGGCGGA AAACCAGTTC GACATTACCC AGTACCAGCA TGTGCCACGG CGTTATTACG GGCGGATCTT CTTCGCCACC GTGATCGTCA TCGCGATCAT CGGTCTGGTG CGGGCCTTCG CCGAAGGCAA GATCGAATGG TCGTACATCG GCCAGTTCCT CACCTCCGAA GCGATCATGT GGGGCCTGTT CAACACGATC ATCATGGCCG TGCTGGCCAT GGCACTCGGC ATCGTGTTCG GCGTGATCAC CGCGATCATG CGCATGTCGG CCAACCCGAT CCTGCGCTAC GTGGCCGTGA CCTACACCTG GCTGTTTCGC GGTACGCCGC TGATTCTGCA ACTGCTGTTG TGGTTCAACC TGGCGCTGAT CTTCCCCACC ATCGGCATTC CCGGCCTGTT CGAACTCGAC ACCGTGAGTT TGATGACCCC GTTCGTGGCC GCCCTGCTCG GCTTGAGCAT CAATCAGGGC GCCTACACCG CTGAAGTGGT GCGCGCCGGC CTGCTCTCGG TGGACACCGG CCAGTACGAA GCCGCCAAGT CGATCGGTAT GCCGCGCCTG CAAGCACTGC GCCGGATCAT CCTGCCCCAG GCCATGCGGA TCATCATTCC GCCGGTGGGC AACGAATTCA TCGGCATGGT GAAAATGACC TCGCTGGCGA GCGTCATCCA GTACTCGGAA CTGCTCTACA ACGCCCAGAA CATTTACTAC GCCAACGCCC GGGTCATGGA GCTGCTGATC GTCGCCGGTA TCTGGTACCT GGCCACCGTC ACCGTCCTGT CCTTTGGTCA AAGCCGTCTG GAGCGTCGTT TCGCTCGCGG CGCCGGCAAG CGTTCTTGA
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Protein sequence | MSQTQAERLQ AERKLAENQF DITQYQHVPR RYYGRIFFAT VIVIAIIGLV RAFAEGKIEW SYIGQFLTSE AIMWGLFNTI IMAVLAMALG IVFGVITAIM RMSANPILRY VAVTYTWLFR GTPLILQLLL WFNLALIFPT IGIPGLFELD TVSLMTPFVA ALLGLSINQG AYTAEVVRAG LLSVDTGQYE AAKSIGMPRL QALRRIILPQ AMRIIIPPVG NEFIGMVKMT SLASVIQYSE LLYNAQNIYY ANARVMELLI VAGIWYLATV TVLSFGQSRL ERRFARGAGK RS
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