Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2815 |
Symbol | |
ID | 3712212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3243985 |
End bp | 3246297 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | lipopolysaccharide biosynthesis |
Protein accession | YP_348546 |
Protein GI | 77459040 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.631673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACA GCCCCAGCAA CTACGTCGAA CGTCCTCTTC AAGCGCATCT GCATCCGCAG CACGGCGACG ACAAGGACAC CCTGGATCTG CTCAATCTGT GGAGGATTAT CTGGCGCGCC AAGTGGCGCA TCGGCTGGCT GGTTCTGCTG AGTTGCGTAT TGGCGGCCGT GGTGGTCTCC AATATCACGC CGCAATACAT TGGCAGCACC ACCCTGCTGT TCAACGACAA AACACCTCCG CTGATGTCGT TCCAGCAAGT CAAGGACTCA GGCGGCAACG CCACAGATTA CTTGCAGACT CAGCAGGCGC TCCTGCAATC GCGGGACCTT GCCGAACGCG CGGTGAAAAA ACTCGGCCTG ACGACCCACC CGGTCACCGA TCCACGCCAG CAGCCCCAAC CCTGGTTTGC TCCGCGCCAA TGGCTGGCCA ACCTGGACCT TGATCAATGG ATCCCGGGAC TCGGTCGATA TTTGCCGCAA AAGAAAGAGC AGCTCACGGA AGCGGACGTC TTCAATCAGG TCACGCAGAA CCTCATGCTG CACACCAGCG TCAAGTTCGT TGGCAAAAGC CAGTTGCTCG AAATCGAAGT CGAACTGCCA GACCCTGTTC TGGCAGCGGC GGCGGCCAAC GCGCTGGCTC AGGGCTTCAC CGACAGCCAG CTCGATACCA GCGAGAAATC GTCGCAAACC ACCACAGCCT GGATGAACAC GCGTCTGATC AAGCTGCGCG ACAACCTGCG TGCGGCCGAG AAAAAGCTTC AGGGTTACCG CGAAGAACAA GGTCTGGTGG ATGTTGGCGG TGTTGCCACC ATCAGCGCCA ACGAACTGGA AATGACCGGT AATCGCATGG TCGACGCCCG GCGCAACCGT GCTGAAGCCG AGAGCGAGTA CCGCCAGGCC AAGGCCCTGG GCAACGGCGA TCTGAGCCGG CTCTCCAGCG TGCCTGCGGT CTTGAGCAAT CCCCTGGTGC AGAAATTCCA GGCCGATCGC GCTGTGGCTC AGGCCAAGGT TGATGAACTG GCGGGCCGCT ATGGTCCAAA GCACCCCAGC CTGATTTCCG CACAAACCGA GTTGCGCACC GCCACCACCA GCCTGCAATT GCAGGTGCAG CAAGTGGTGG CCGGTATCGA GCGGCAATAC CAGCTCGCCA CGGCGAGCGA AGCGTCGCTG CGTCAATCCT TCAACAGCAA CAAGGCGCAA ATCCAGGACA TCGCGCGCAA AGAGTTCCAG TTGCGCGAGT TCCAGCGTGA AGTCGACAGC ACGCGCGCAC TGTATGAAAC CTTCGTCACC CGCCTGAAAG AAACCACGGC CACCGCCGAC ATGGACTCGA CGAAAGTGCG CATCGTCGAC CCGGCCATTG TGCCTGTCGA CGCCAGCAAG CCCCGCAAGA CATTGATTGT CGGGATCGTC GGGCTGATCG CTGCGGTCAT CGGCGTCGGG CTGGCACTGC TCTTCGAGAG TCTGAGCAAT ACCTTCAAAA CCGATGAGAC GGTCGAGAGC GTGTTGAATG TTCCACTGCT CAGCGTCGTG CCGTTGGTGG TGAAAAAAAG TCGCCGGCAA CTGGCGCGCC TTTTCGAAGA CAACGACAAC CCGCGTTTTT CCGAGACCAT TCGCAACCTG CGTACCTGGC TGATGCTGCA AAGCAGCGAA AAGCCCTCAC AGGTGGTGCT CGTGACCTCC ACGGTTGCCG GCGAGGGTAA AAGCACCATC GCCACCAATC TGGCCAGTTC ACTGACGCCG CTGGAGCGCG TGCTGCTGAT CGATGCCGAC ATGCGTCAGC CAACCCTGTC GCTGAACTTC GATTTCCCAC CGGACAGCCC GGGACTGGCG AATGTCATTG CCGGCACGGC CAGGCTTGAA GACTGCATTG TTTCAGTGGG CAATCTGGAC ATGCTGCCGG CCGGGAAGGT CTTGCCGCCG TCACTGGATA TGTTCGTTGC ACCGCGCCTG CCATCCCCTG GCGATCCGCT CAACCCGGTC CAGCCACCGC CACAGGACTT GCTCAGCTCG CCCCGCATGG CGCGCATGCT CGAGGCGCTC AGATCACGCT ATCGCCACAT CATTATCGAC TCTCCCCCTG CGGAGATGAT CAGTGACGCG CTGTTGCTGG CCAGACATTC CGATGCGGTG ATCTATGTCG TCAAGGCTGA CAGCACCTCG ATCAGCCAGG TTCAGCGAGG GATTGCCATG TTGCAACAAA GCCATGTGCC GGTCTTTGGC ACGGTGCTCA ACCAGGTCGA CCTGCGCAAG GCGCGCAAGT ACGGCTACCA CCATTCCCGG GCGTTCTATA ACTACGATTT CGCGCCCAGG TAA
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Protein sequence | MDNSPSNYVE RPLQAHLHPQ HGDDKDTLDL LNLWRIIWRA KWRIGWLVLL SCVLAAVVVS NITPQYIGST TLLFNDKTPP LMSFQQVKDS GGNATDYLQT QQALLQSRDL AERAVKKLGL TTHPVTDPRQ QPQPWFAPRQ WLANLDLDQW IPGLGRYLPQ KKEQLTEADV FNQVTQNLML HTSVKFVGKS QLLEIEVELP DPVLAAAAAN ALAQGFTDSQ LDTSEKSSQT TTAWMNTRLI KLRDNLRAAE KKLQGYREEQ GLVDVGGVAT ISANELEMTG NRMVDARRNR AEAESEYRQA KALGNGDLSR LSSVPAVLSN PLVQKFQADR AVAQAKVDEL AGRYGPKHPS LISAQTELRT ATTSLQLQVQ QVVAGIERQY QLATASEASL RQSFNSNKAQ IQDIARKEFQ LREFQREVDS TRALYETFVT RLKETTATAD MDSTKVRIVD PAIVPVDASK PRKTLIVGIV GLIAAVIGVG LALLFESLSN TFKTDETVES VLNVPLLSVV PLVVKKSRRQ LARLFEDNDN PRFSETIRNL RTWLMLQSSE KPSQVVLVTS TVAGEGKSTI ATNLASSLTP LERVLLIDAD MRQPTLSLNF DFPPDSPGLA NVIAGTARLE DCIVSVGNLD MLPAGKVLPP SLDMFVAPRL PSPGDPLNPV QPPPQDLLSS PRMARMLEAL RSRYRHIIID SPPAEMISDA LLLARHSDAV IYVVKADSTS ISQVQRGIAM LQQSHVPVFG TVLNQVDLRK ARKYGYHHSR AFYNYDFAPR
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