| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2745 |
|---|
| Symbol | |
|---|
| ID | 3714486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3163115 |
|---|
| End bp | 3164674 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_348476 |
|---|
| Protein GI | 77458970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000193004 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTA TTGATTTCTT TGACCGTGGC TGGCGGATCA ATCCGCATGG CGCGGCGTAT
ATCCAGGACG ATCGGGTGTT CACTTTTACC GAAGTCCGCA ACCTGTCATG CCGGATCGCC
AACGCACTGT TGGCGGCCGG TTTGCCCAGC GGCACCAAGG GCGCCATCTG GTCTGCCAAT
GATGCAGTGG CGTGGACCTG CACCTTGGGG TTATGGCGCG CCAACCTTTG CTGGATTCCT
GTTGGTGCAC GCAACAGCGC CGAAGAGAAC CGTCACGTGC TCGACGCATT CGACTGCGAA
GTGCTGTTTT TCCAGAAAGA GTTCGCGCCG ATCATCGACG CGTTGCGTCC TGGCCTGCCG
AAAATTCGTC TGTGGATCTG TATCGACGAG CACCTGCCGG GGGCACCGTC GCTCAAGTCC
TGGATCGATG GTCAGCCGGT CACGGCACCG GAGGTCGAGT ATCAACTGGA CGATGTCGTG
GCACTCTCGC CAACCGGCGG CACCACCGGG CTGCCGAAGG GGGTAATGAA CACTCATCGC
AGCATCCAGA CGTTCTGCGC GCACTTCATG ATCAATTTCC CTTACGGGGA TGACCATCCG
CCAGTCAACC TGGCGGCGGC GCCAATGACC CACACCGCTG GCACGCTGTC GCTGCCGTGC
ACCTCCCGGG GCGGTACGGT TGTGATCATT ACCAAACCGG ATCCGGCTCT GATGCTGGCA
ATGATCCCGA AGTACAAGGT CACCGAAACC TTTTTGCCGC CTACCGTGAT TTATCGACTG
CTGGACGTGC CGGATCTGGC GCAGAAGGTC GATTTCAGCT CGCTGAAGTA TTTCCTGTAC
GGCGCGGCGC CGATGTCGGT GGACAAACTC AAGCAAGCCA TCGAGACCTT CGGCCCGGTC
ATGGCCGGTG GTTACGGCCA GACTGAAGCC CCAGCCTCGA TCTCCAACCT GCCGCCCGCC
GAGCATCTGC ACGGTGGACG CCTGGCATCG GACGAGCGTC TGTCTTCTGT GGGCCGGCCC
AATCCGCTGG TGCGCGTGGA AATCCTCAGC GACGCCGGGG ACATCCTCGG CCAGGGGCAA
ACCGGTGAGA TCTGTGTGCG CGGCGACCTG GTAATGAAGG GGTACTACAA GGATCCGCAG
AAAACTGCAG AAACCATCAT TGATGGCTGG CTGCACACCG GTGATATCGG TCACCTCGAT
GCCCACGGCT ACCTGCACAT TACCGACCGC AAGAAAGACA TGATCATTTC CGGTGGATTC
AATGTTTATC CCAGCGAAGT CGAGCAAGTG CTGTGGAGTC ATCCGGCGGT GCAGGACTGC
GCGGTCATCG GTGTGCCGGA TGAGCAATGG GGCGAGGGCG TGAAAGCCGT GGTTGAGTTG
AGCGCCGGGC TTACCGTCAC CGCCGAGGAG TTGATCGAGC TGTGCAAGAG CCGGCTCGGC
TCGGTCAAGT CGCCGAAAAC CGTGGATTTC ATTGATGCAT TGCCGCGCAG CCCGGTCGGC
AAGGTGCTGA AGAAAGATCT GCGTGCCCAT TACTGGCAAA ACGTTGACCG GCGTATCTGA
|
|---|
| Protein sequence | MAIIDFFDRG WRINPHGAAY IQDDRVFTFT EVRNLSCRIA NALLAAGLPS GTKGAIWSAN
DAVAWTCTLG LWRANLCWIP VGARNSAEEN RHVLDAFDCE VLFFQKEFAP IIDALRPGLP
KIRLWICIDE HLPGAPSLKS WIDGQPVTAP EVEYQLDDVV ALSPTGGTTG LPKGVMNTHR
SIQTFCAHFM INFPYGDDHP PVNLAAAPMT HTAGTLSLPC TSRGGTVVII TKPDPALMLA
MIPKYKVTET FLPPTVIYRL LDVPDLAQKV DFSSLKYFLY GAAPMSVDKL KQAIETFGPV
MAGGYGQTEA PASISNLPPA EHLHGGRLAS DERLSSVGRP NPLVRVEILS DAGDILGQGQ
TGEICVRGDL VMKGYYKDPQ KTAETIIDGW LHTGDIGHLD AHGYLHITDR KKDMIISGGF
NVYPSEVEQV LWSHPAVQDC AVIGVPDEQW GEGVKAVVEL SAGLTVTAEE LIELCKSRLG
SVKSPKTVDF IDALPRSPVG KVLKKDLRAH YWQNVDRRI
|
|---|
| |