Gene Pfl01_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2729 
Symbol 
ID3714424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3145843 
End bp3147183 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content60% 
IMG OID 
Productxanthine/uracil permease 
Protein accessionYP_348460 
Protein GI77458954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.562669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC AACGCATTCA TCCGGTGGAC GAGGTTTTGC CACTGCGCCA GTTGTTCACG 
TTTGGCTTGC AGCATGTTCT GGTGATGTAC GCGGGAGCGG TGGCGGTGCC GCTGATTCTT
GGCAGCGCGA TGGGGCTGAC CTCGGCGCAA GTCGTGTTGC TGATCAACGC CAACCTGTTG
ACCTCTGGTG TGGCGACGCT GATTCAAACC CTCGGTTTCT GGAAGTTCGG CGCCCGCCTG
CCGCTGATTC AGGGCTGCTC GTTCATTGCC CTGGCGCCGA TGATCATGAT CGGCAAGGAG
TTCGGTCTCA GCCAGATTTT CGGTGCGGTG ATCGCGGCGG GATTTATCAC CGTTGCGCTG
GCACCGGTGT TCAGCCGCTT GCTGCGGTTT TTTCCGCCGG TGGTGATTGG CAGTCTGATC
ACCATTATCG GCATCTCGCT GATGCCGGCG GCGGCGATCT GGCTGGGCGG TGGCAATCCC
GATTCGGCAG ATTTTGGCAA TCCCGCCAAC CTGTTGCTCG GTTTGGCCAC GGTCAGTGTG
ACGCTGGTGA TCTACGCCAG ATTCAAGGGC TTCATCGGCA ACCTCAGCGT GCTGATTGGC
CTCTTTGTCG GCAGCCTGAT CGCAGCGGCT TGCGGCATGA CGCACTTCAA TCGGGTCAGC
GAAGCGGCCT GGTTTGAGTT GAGTGCGCCG ATGGCTTTCG GCGCGCCGGA ATTCGCGCCG
GTGCCGATTC TGATCATGAC CCTGGCGATG CTGGTCATCA TGGCCGAGAC CACCGGCAAC
TGTCTGGCGA TCGGCAAATT GACCGGCAAA CCGACCACGC AACAAACCCT CGGCAACGCA
TTCCGCGCCG ATGGCTTGTC GACCATGCTC GGTGGCTTGT TCAACAGCTT TCCTTACAAC
GCCTTTACTC AGAACACCGG CTTGATTGCG CTCTCCAACG TTAAAAGCCG CTTCGTTGTG
GCCGCTGCCG GGGCAATCAT GGTGCTGATG GGCCTGTTCC CGAAACTCGG CGCGTTGATC
GCCGCAGTGC CGACGCCGGT GCTCGGTGGC TGCGCGATTG TGATGTTCGG CATGACCACG
GTGGCGGGGA TTCAGGAACT GTCACGGGTG CAATTCGAGG GCACGCGCAA CGGCATTATC
GTCGCCGTGT CAGTGAGTGC CGGGGTGCTG CCGATGTCCT TTCCGGCGCT GTTCGAACAC
GTCGGCCCGA CCCTGAAACT GGTGCTCGAC AGCGGGATTT TCCTCGGAGC GATCACCGCC
ATCGTCCTCA ACGTTCTGCT CAACGATGAA AAAAAACCGA CCGAAACCAT CGGCGCTACA
TCGGCTGAAC TGGCCGACTG A
 
Protein sequence
MTTQRIHPVD EVLPLRQLFT FGLQHVLVMY AGAVAVPLIL GSAMGLTSAQ VVLLINANLL 
TSGVATLIQT LGFWKFGARL PLIQGCSFIA LAPMIMIGKE FGLSQIFGAV IAAGFITVAL
APVFSRLLRF FPPVVIGSLI TIIGISLMPA AAIWLGGGNP DSADFGNPAN LLLGLATVSV
TLVIYARFKG FIGNLSVLIG LFVGSLIAAA CGMTHFNRVS EAAWFELSAP MAFGAPEFAP
VPILIMTLAM LVIMAETTGN CLAIGKLTGK PTTQQTLGNA FRADGLSTML GGLFNSFPYN
AFTQNTGLIA LSNVKSRFVV AAAGAIMVLM GLFPKLGALI AAVPTPVLGG CAIVMFGMTT
VAGIQELSRV QFEGTRNGII VAVSVSAGVL PMSFPALFEH VGPTLKLVLD SGIFLGAITA
IVLNVLLNDE KKPTETIGAT SAELAD