Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2717 |
Symbol | |
ID | 3714412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3133816 |
End bp | 3134793 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | transcriptional regulator |
Protein accession | YP_348448 |
Protein GI | 77458942 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.787301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGCG TCGGCTATCT GATTACCGAA GGTTTTCAGG TGATGTCCCT GGCAACCCAG GCTGTATTCG AGTTCGCCAA CATCGTTGCG GGAGAAGAGA TCTACAAGGT CCAGAACTTC TCGATCGGTG GTGGGACCGT GCGTTCTTCG TTGGGCATGT ACATCGACAC GCTCCCTCTG GGCGCCCCGG GATTGGCCGA CACGTGGATG ATTACCGGTA CGCTGACCCC GTTGAATCGA CCAGATGAAG AAGTGTTGGC CAGCGTGCGC GCCTTCGTCG ATGGAGCCCG ACGCACAGCA GGTCTGTGTA CCGGCTCGTT CGTTCTGGCG CAGGCTGGGG TTCTGGACGA TCGGAGGGCG ACCACCCACT GGGCCTATGC GAACAAGCTC CGTGAGCTGC ATCCAAGAAT CGAGGTCGAG GAAGACCGGA TCTTCATCGT CGACGGTCCC GTCTGGACGT CGGCAGGCAT GACAGCCGCG CTGGACATGG CGCTGGGCAT GGTGGAAAAG GATCTGGGCA CCGACATGGC CAGGTCGGTG GCGCACAAAC TGGTCATGCA TCAACGGCGT TCGGGTGGGC AATCCCAGCA TTCGGAACTG CTTACGCTTG CTCCAAAGTC GGACCGTATT CAAAGTGCGC TGGAGTATGC GCGCACGCAC CTGGACCGCC CGCTCAGCGT GGAGGAACTT GCCGACGTCG TGCACTTGAG CCCAAGACAA TTCACCCGGG TGTTTACTGC CGAGACAGGC CAGTCACCGG CCAAGGCTGT TGAAAGCCTG CGTCTGGAGG CCGCTCGCGT GATGATCGAG CAAAGTCGTC ACAGCCTGGA ACGCGTGGCG AAGGAAACGG GGTTTCGAGA CCGTCGCCAC ATGCGCGAAG TATTCATGCG AGGGTTTGGC GTTCCGCCGC AGGCAGTTCG AAGGGATGCC AGGCGGATCG GCCAGGAGAA TCCATCTGAT CGGGCCGCTC ATCCGTAA
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Protein sequence | MHRVGYLITE GFQVMSLATQ AVFEFANIVA GEEIYKVQNF SIGGGTVRSS LGMYIDTLPL GAPGLADTWM ITGTLTPLNR PDEEVLASVR AFVDGARRTA GLCTGSFVLA QAGVLDDRRA TTHWAYANKL RELHPRIEVE EDRIFIVDGP VWTSAGMTAA LDMALGMVEK DLGTDMARSV AHKLVMHQRR SGGQSQHSEL LTLAPKSDRI QSALEYARTH LDRPLSVEEL ADVVHLSPRQ FTRVFTAETG QSPAKAVESL RLEAARVMIE QSRHSLERVA KETGFRDRRH MREVFMRGFG VPPQAVRRDA RRIGQENPSD RAAHP
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