Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2702 |
Symbol | |
ID | 3714397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3112510 |
End bp | 3113841 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_348433 |
Protein GI | 77458927 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.118263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCC GGATGCTGCG GCGCGACACC CTCAGCCGGC GGATTGCCCT GACAATCGTC GCGGCGATGC TCGCTTCGCT GCTGCTCAAT GCGCTGTTCG TTCAGGTCGC GGGGATCTGG GCCCGACCGC CGATCGAGCG CACCGGGCTG CTGGAACAGA TCGCCGCCAC CACCCGAGTG ATCGAGGCAG CGCCGGCGAC CTTGCGCCCG CAACTGGCCA GTGCCGCCAG CAGCCCGATG CTTGAAGTGC TGTGGAAACC TCGTCGGGTC GACTTCGGCC TGCCGGGGGA AGGCGAACAG GTCGAGGCCG GAAAAGTGCC GGCGCTGCGG CAATTGCTCG GCGATGACCG GCAGATCGAC GTGTTCAACC CCGATGACTG GCCAGCCGGT AGCCCTCGCG CGCACTACAT GGCGCTGGTA CGGCTGGCCG ATGACAGCTG GCTGTCGTTC ACGCCGCCGG AGCGCAGTTG GGGCTTGAGC CTGAACGTGC GGATTGCCGT CATCGTTGCC CTGGGGCTGG TCGCCACCCT GTTGGTCGCC TGGCTCGCCA CACGGCAACT GGCTCAGCCG TTGCAGCGCT TTGCCCATGC GGCGCGGCGT TTCGGCGGGG ATCTGAAAGC GCCGCCGATT CATCTCGAAG GCCCGCACGA AATCCGTCAG GCCATCGTCG CGTTCAACAC GATGCAGGCG CAGATCCAGC ATTTCATCGG CGAGCGCACC CACATGCTCG CCGCCATCTC CCACGACTTG CGCGCCCCGC TGACCCGGAT GCGCCTGCGC AGCGAGTTCA TGGAGGATCT GGACCATCAG GGCAAACTGA TCCGCGACAT CGAGGAAATG CAATCGATGA TCAACGCCGC CCTGGCGTTC TTCCGGGAAG ACACCCACCT GGAGCAATCC ACCGCGTTCG ATCTGTCGGA GTTGCTGCAA ACCATCGTCG ATGACTACCG CGATCAGCAC ATCGACATCG ACTTCAGCGG TCCGGCACAT GTGGTGTACG ACGGCCGGCC GCTGGGCATC AAACGGGTCA TCGTCAATCT GTTGGATAAC GCGGTGAAAT ACGCACAGCG CCCCAGCGTG GCGCTGAGCA GCGATGACAC GTCGATCCGC ATCGAGGTGA TAGACGAGGG GCCGGGAATT CCTGAGGACG CACTGGAGCG GGTATTCGAT CCGTTCTTCC GACTCGAGAC CTCGCGCAAC CGCGACACCG GCGGGGTCGG GCTCGGTCTT TCGGCGGCAC GGGGAATCAT TCGTGAACAG GGTGGCGAAC TCAGTTTGCG TAACCGCCGC AGCGGCGGCT TACGCGCCCG GGTTGAATTG CCGCATCGCT GA
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Protein sequence | MIGRMLRRDT LSRRIALTIV AAMLASLLLN ALFVQVAGIW ARPPIERTGL LEQIAATTRV IEAAPATLRP QLASAASSPM LEVLWKPRRV DFGLPGEGEQ VEAGKVPALR QLLGDDRQID VFNPDDWPAG SPRAHYMALV RLADDSWLSF TPPERSWGLS LNVRIAVIVA LGLVATLLVA WLATRQLAQP LQRFAHAARR FGGDLKAPPI HLEGPHEIRQ AIVAFNTMQA QIQHFIGERT HMLAAISHDL RAPLTRMRLR SEFMEDLDHQ GKLIRDIEEM QSMINAALAF FREDTHLEQS TAFDLSELLQ TIVDDYRDQH IDIDFSGPAH VVYDGRPLGI KRVIVNLLDN AVKYAQRPSV ALSSDDTSIR IEVIDEGPGI PEDALERVFD PFFRLETSRN RDTGGVGLGL SAARGIIREQ GGELSLRNRR SGGLRARVEL PHR
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