Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2629 |
Symbol | |
ID | 3714270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3006001 |
End bp | 3009306 |
Gene Length | 3306 bp |
Protein Length | 1101 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348360 |
Protein GI | 77458854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGAA GCGAAATGGA AACTGGTATT TCGAAAGCCC CCAAGGAAAA TCTCAACGGT CCAACTGCAA ATGCATCGAC CCAAACAGCA GCGGTTGAGA GCAAGCCAGC GCTGGAGCTT GATCCGCAGC CCAAAGCGCC TGACAGTTGT TCCAACGCGT TCGACAAGGT AAAGACACCT TGCTCGACGT CCTATGGTGA GGTGATTTAC GCCACCAAGG AAAAAATGTT CTATCTATTG CCAGAACGTG CTGCCAGCTC GATCAAAGAA GCGATGAATG AACTTGAACA ACATATCAGC GTAAGCAAGT CTCCAGAAGA ACGGCTCAAG GGGATGAACA CCGCAGGGCT GCTGGAATAC TTCCTTGAGC CAAAGCTGAC TAACTTCCTG CAAGGCGAGC AAAAAAGCCG AATGCTGGAA ATCGAAGCTC AGGAGCCGGA TATCGCGCAA CCCACGATGG CTATGCGCTT GAAGGCTGTC AGCCGAGAAG CCCGCAATAG TGCGGCGCTG GACAAGCAAC CGGACCAGAG CGAATACGCT CGCAATCGGG AACTTGCCAA TCAACAACAA GCGAGTCTGC TTGAAGCCAA CTCTGATGGG CAGAAACTGC AGCGGCTCTA CAGCGAATGG AAGAAGCTGA AAAACATCGC CGTCGCGCAA GCCAAAGTAG CAGGCTACAC CTACGAAAGT GGCAACCTGT TTTCTCCGGG AGCACTCGAA GCGAGAAGTC GTGTACAGAC CTATCTGAAG GCACGTTCGG CACTCACCTC CAGTGGCAAG CTGACGACTC TGAAAGAAGA AGACTTCCAA AAAAACAAAA AAGCCTATCT GGACGCGACT AACTGCGTAA TCGATGGCAA AGCCCGGATG TGTGGCTATT TGAAGGAAGT CGCCAACGAG CGCAAGAAAG TCGAAAAAGA CTTCGCCGCG TATATTGATT CGATCTTGAA AGTTGCTGAC TACGGTTTGG CCCTGCCGGA GTTTGCACTC ATTCCCGACA CTGGCGATAT CAGTGCAGGC ATCGAGAAAT TCAAGGCTTA CCTTGAGATG GAACAGCAAC AGATCAAGCT CACCGAGCAG ATCCGTTCGA AATATAAAGC CTGGATTGAC GCGAGCGGGC AGAACGTCGC GGCACCTACA GGTATCGTTG AAGCGGAGCA AGCAGAATGG CAGCGTATCC AGCAAGCTCG TCTGAAGCTT CGTGAAGACG CCGAGGCAGC AGTGGCTGCT GCCTTGCCAT TACGTCACCT GTTATGGGAG CCCGAGCAGT TTCAACCGAA ACCGGAAGAG CGCTTGGTCA AGGCAGGATT TCCTTTGCGC GAAGTCGCGC TTTTCAATAG CCCCAACAGT CCAGTCAAAC ACTTGAGCTT GCTCAATCTT GAAGGCATCA CAAAGGTGCT GAAAAAAGAC GCAAGCGAAA TCGGTGCCGC TGCAAGCAAG GACTTGCAGA AACTTCCAGG TAACAGCAAC GGAAAGGCAG AGTCGGACTC TGACGACAAC CCCTTCCATG AATGGCTTCG TGAACAAGGC GCTTTGGCCA TCAAGGACCA ACAGAGCGAC TGGTTTGATG AAAAAGGCTG GTTTGACGTT GAGATGTTCC ACTCTTACTT GAAGTCAAAG AACTACAAGG TCGAAACGTT TGAGGATGCG GGGGCGCGCA AAGATTGGGG GCTCCGTCTT CGTCAGTTGC TTTTTAAGGA AGAAGTCAGA AGCTCGTTGC GTCTGTTCGA CAACAGCCCT CAAGCTCAAC TGGTTCGCTG CCTCACCCCA CCGCAGTCAT CAATTCACAC CGCTACCAAA GTCAGCGGCC CAAGCTTCAG CGTTGCGGAT AATTTCAAAG CCTCCGCCAA AGCCGAAGCA AGTCTGGGAA TCGACCTCGC TCGCGGTGAG GTTGAATTGA TGAAAATGGA TCTTCCGGGG AGAGATCAAG CGAAAGACAT CCTGGTGCCT TACCTGGATT ATGAGAAAAA CCGCAAAAAT CTGAACCTGG GTCGGTTCTC GATTCACTTG GGCGCTAGAG CCTGGGGGTA TACGGGTGCA ACCCTCCTCC TTTCTTCCAG CGTGCAGTTG GGCCGCGCGA ACGTGCAAGG CGGGCTCAAC CTTCCGGAAA TCACCGATGC AAAACGCGCG GATACCACCA ATGCGACTGC CGCAACCGCG CGAAGTGAAC CTGTACTTGA GGGCGACGCT GCCAAGGTTC GGGTGGAAGA CGGCGCTAAA GCCCAATTCA ATCTTTTTGC TGGGGTGCAA GCCGGGATTC TGCTGACCGG TGCCTTGAAC TGGGCACCAC CAAAAGACAT AGCAGCCCTG CGCGCAGCGC CAACACCGGG AATGAGTAAC AGCGTCAACA GCACGAAAGC CAGCCAATGG TCGAGTCTAG CGAGACTGAC AGCTGGATTT ACTGCCGCTT ACGGCCTCGG TGCAAACGCA GACATTGGCA TTTCCTTGCA CGAAGGCCGC TTCATCATGC GGTTCAAGGC CTCTCTCATT GTCGGCACAG GTGCCGGCGG CGAATTCCAG TTTGAAGTCG GGTATGACGG CGTTACTGAC CTGATTAACC TGCTGCGCCG TGAGATGCAC AAAAATCAGG ACAAATCGCT GATTTTTGTG ACGGATGATG CGGCTGATTA CATCGATAAG CTCAACTTCC TAGGTGCTGC CGGCATGGAA GTAGCGATGT CTTATATGCA GGGTGTTGAT ATGGTGATGT CGTTGTATGA GGCGTTAACG GGGGGTGGTC GAGGTGGTAC CGTTGCTCAT ACCATCATGA CATATCGAAA CCAAGCAGAG CTGGAAGAGT GGTTCATAGC AGCTACGCCG GGAGCGCTGG GCCCAATGCT AATGACACTT ACCAGTGCAG CGGAAGCATT CAAAATTCCA CTAAAGCTAT CCGACAGCAG CCAGGCTTCC GAATATAGTC ATGACCAAGC TCACCTTCTT CAGCAAAAAG CAATTGAGCG CATTCTTGGT TGGATATTAA AGCGCGCCGA AAAAGATGGA ACTATTTCAA AGGCGAAAAG CCAATTTGAA GAAGCCTGTA TGTGCATGAA CAGGTTTGGG ACAAAAGAGC AGAACCAAAA CCAGAAGTAC TGCGAGAACC GCCTGCACAT GGATAACTTC ATGTCAGAAG CAGTTATGCG ACTTCAAGAT CGAACAAGTG ACGACACCCG AGCCCGATAC AAAGCGCACG TAAAAACTCT TGGCGAGCGG CTAGACGGCT ATTGCTCTCG GATTACACAC TACGGAAGAA CATATTTGCC AGGTGGAAAA GCAACCTATA CCGGACCGGA CGATAGCGTA AAATGA
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Protein sequence | MNGSEMETGI SKAPKENLNG PTANASTQTA AVESKPALEL DPQPKAPDSC SNAFDKVKTP CSTSYGEVIY ATKEKMFYLL PERAASSIKE AMNELEQHIS VSKSPEERLK GMNTAGLLEY FLEPKLTNFL QGEQKSRMLE IEAQEPDIAQ PTMAMRLKAV SREARNSAAL DKQPDQSEYA RNRELANQQQ ASLLEANSDG QKLQRLYSEW KKLKNIAVAQ AKVAGYTYES GNLFSPGALE ARSRVQTYLK ARSALTSSGK LTTLKEEDFQ KNKKAYLDAT NCVIDGKARM CGYLKEVANE RKKVEKDFAA YIDSILKVAD YGLALPEFAL IPDTGDISAG IEKFKAYLEM EQQQIKLTEQ IRSKYKAWID ASGQNVAAPT GIVEAEQAEW QRIQQARLKL REDAEAAVAA ALPLRHLLWE PEQFQPKPEE RLVKAGFPLR EVALFNSPNS PVKHLSLLNL EGITKVLKKD ASEIGAAASK DLQKLPGNSN GKAESDSDDN PFHEWLREQG ALAIKDQQSD WFDEKGWFDV EMFHSYLKSK NYKVETFEDA GARKDWGLRL RQLLFKEEVR SSLRLFDNSP QAQLVRCLTP PQSSIHTATK VSGPSFSVAD NFKASAKAEA SLGIDLARGE VELMKMDLPG RDQAKDILVP YLDYEKNRKN LNLGRFSIHL GARAWGYTGA TLLLSSSVQL GRANVQGGLN LPEITDAKRA DTTNATAATA RSEPVLEGDA AKVRVEDGAK AQFNLFAGVQ AGILLTGALN WAPPKDIAAL RAAPTPGMSN SVNSTKASQW SSLARLTAGF TAAYGLGANA DIGISLHEGR FIMRFKASLI VGTGAGGEFQ FEVGYDGVTD LINLLRREMH KNQDKSLIFV TDDAADYIDK LNFLGAAGME VAMSYMQGVD MVMSLYEALT GGGRGGTVAH TIMTYRNQAE LEEWFIAATP GALGPMLMTL TSAAEAFKIP LKLSDSSQAS EYSHDQAHLL QQKAIERILG WILKRAEKDG TISKAKSQFE EACMCMNRFG TKEQNQNQKY CENRLHMDNF MSEAVMRLQD RTSDDTRARY KAHVKTLGER LDGYCSRITH YGRTYLPGGK ATYTGPDDSV K
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