Gene Pfl01_2629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2629 
Symbol 
ID3714270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3006001 
End bp3009306 
Gene Length3306 bp 
Protein Length1101 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348360 
Protein GI77458854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGAA GCGAAATGGA AACTGGTATT TCGAAAGCCC CCAAGGAAAA TCTCAACGGT 
CCAACTGCAA ATGCATCGAC CCAAACAGCA GCGGTTGAGA GCAAGCCAGC GCTGGAGCTT
GATCCGCAGC CCAAAGCGCC TGACAGTTGT TCCAACGCGT TCGACAAGGT AAAGACACCT
TGCTCGACGT CCTATGGTGA GGTGATTTAC GCCACCAAGG AAAAAATGTT CTATCTATTG
CCAGAACGTG CTGCCAGCTC GATCAAAGAA GCGATGAATG AACTTGAACA ACATATCAGC
GTAAGCAAGT CTCCAGAAGA ACGGCTCAAG GGGATGAACA CCGCAGGGCT GCTGGAATAC
TTCCTTGAGC CAAAGCTGAC TAACTTCCTG CAAGGCGAGC AAAAAAGCCG AATGCTGGAA
ATCGAAGCTC AGGAGCCGGA TATCGCGCAA CCCACGATGG CTATGCGCTT GAAGGCTGTC
AGCCGAGAAG CCCGCAATAG TGCGGCGCTG GACAAGCAAC CGGACCAGAG CGAATACGCT
CGCAATCGGG AACTTGCCAA TCAACAACAA GCGAGTCTGC TTGAAGCCAA CTCTGATGGG
CAGAAACTGC AGCGGCTCTA CAGCGAATGG AAGAAGCTGA AAAACATCGC CGTCGCGCAA
GCCAAAGTAG CAGGCTACAC CTACGAAAGT GGCAACCTGT TTTCTCCGGG AGCACTCGAA
GCGAGAAGTC GTGTACAGAC CTATCTGAAG GCACGTTCGG CACTCACCTC CAGTGGCAAG
CTGACGACTC TGAAAGAAGA AGACTTCCAA AAAAACAAAA AAGCCTATCT GGACGCGACT
AACTGCGTAA TCGATGGCAA AGCCCGGATG TGTGGCTATT TGAAGGAAGT CGCCAACGAG
CGCAAGAAAG TCGAAAAAGA CTTCGCCGCG TATATTGATT CGATCTTGAA AGTTGCTGAC
TACGGTTTGG CCCTGCCGGA GTTTGCACTC ATTCCCGACA CTGGCGATAT CAGTGCAGGC
ATCGAGAAAT TCAAGGCTTA CCTTGAGATG GAACAGCAAC AGATCAAGCT CACCGAGCAG
ATCCGTTCGA AATATAAAGC CTGGATTGAC GCGAGCGGGC AGAACGTCGC GGCACCTACA
GGTATCGTTG AAGCGGAGCA AGCAGAATGG CAGCGTATCC AGCAAGCTCG TCTGAAGCTT
CGTGAAGACG CCGAGGCAGC AGTGGCTGCT GCCTTGCCAT TACGTCACCT GTTATGGGAG
CCCGAGCAGT TTCAACCGAA ACCGGAAGAG CGCTTGGTCA AGGCAGGATT TCCTTTGCGC
GAAGTCGCGC TTTTCAATAG CCCCAACAGT CCAGTCAAAC ACTTGAGCTT GCTCAATCTT
GAAGGCATCA CAAAGGTGCT GAAAAAAGAC GCAAGCGAAA TCGGTGCCGC TGCAAGCAAG
GACTTGCAGA AACTTCCAGG TAACAGCAAC GGAAAGGCAG AGTCGGACTC TGACGACAAC
CCCTTCCATG AATGGCTTCG TGAACAAGGC GCTTTGGCCA TCAAGGACCA ACAGAGCGAC
TGGTTTGATG AAAAAGGCTG GTTTGACGTT GAGATGTTCC ACTCTTACTT GAAGTCAAAG
AACTACAAGG TCGAAACGTT TGAGGATGCG GGGGCGCGCA AAGATTGGGG GCTCCGTCTT
CGTCAGTTGC TTTTTAAGGA AGAAGTCAGA AGCTCGTTGC GTCTGTTCGA CAACAGCCCT
CAAGCTCAAC TGGTTCGCTG CCTCACCCCA CCGCAGTCAT CAATTCACAC CGCTACCAAA
GTCAGCGGCC CAAGCTTCAG CGTTGCGGAT AATTTCAAAG CCTCCGCCAA AGCCGAAGCA
AGTCTGGGAA TCGACCTCGC TCGCGGTGAG GTTGAATTGA TGAAAATGGA TCTTCCGGGG
AGAGATCAAG CGAAAGACAT CCTGGTGCCT TACCTGGATT ATGAGAAAAA CCGCAAAAAT
CTGAACCTGG GTCGGTTCTC GATTCACTTG GGCGCTAGAG CCTGGGGGTA TACGGGTGCA
ACCCTCCTCC TTTCTTCCAG CGTGCAGTTG GGCCGCGCGA ACGTGCAAGG CGGGCTCAAC
CTTCCGGAAA TCACCGATGC AAAACGCGCG GATACCACCA ATGCGACTGC CGCAACCGCG
CGAAGTGAAC CTGTACTTGA GGGCGACGCT GCCAAGGTTC GGGTGGAAGA CGGCGCTAAA
GCCCAATTCA ATCTTTTTGC TGGGGTGCAA GCCGGGATTC TGCTGACCGG TGCCTTGAAC
TGGGCACCAC CAAAAGACAT AGCAGCCCTG CGCGCAGCGC CAACACCGGG AATGAGTAAC
AGCGTCAACA GCACGAAAGC CAGCCAATGG TCGAGTCTAG CGAGACTGAC AGCTGGATTT
ACTGCCGCTT ACGGCCTCGG TGCAAACGCA GACATTGGCA TTTCCTTGCA CGAAGGCCGC
TTCATCATGC GGTTCAAGGC CTCTCTCATT GTCGGCACAG GTGCCGGCGG CGAATTCCAG
TTTGAAGTCG GGTATGACGG CGTTACTGAC CTGATTAACC TGCTGCGCCG TGAGATGCAC
AAAAATCAGG ACAAATCGCT GATTTTTGTG ACGGATGATG CGGCTGATTA CATCGATAAG
CTCAACTTCC TAGGTGCTGC CGGCATGGAA GTAGCGATGT CTTATATGCA GGGTGTTGAT
ATGGTGATGT CGTTGTATGA GGCGTTAACG GGGGGTGGTC GAGGTGGTAC CGTTGCTCAT
ACCATCATGA CATATCGAAA CCAAGCAGAG CTGGAAGAGT GGTTCATAGC AGCTACGCCG
GGAGCGCTGG GCCCAATGCT AATGACACTT ACCAGTGCAG CGGAAGCATT CAAAATTCCA
CTAAAGCTAT CCGACAGCAG CCAGGCTTCC GAATATAGTC ATGACCAAGC TCACCTTCTT
CAGCAAAAAG CAATTGAGCG CATTCTTGGT TGGATATTAA AGCGCGCCGA AAAAGATGGA
ACTATTTCAA AGGCGAAAAG CCAATTTGAA GAAGCCTGTA TGTGCATGAA CAGGTTTGGG
ACAAAAGAGC AGAACCAAAA CCAGAAGTAC TGCGAGAACC GCCTGCACAT GGATAACTTC
ATGTCAGAAG CAGTTATGCG ACTTCAAGAT CGAACAAGTG ACGACACCCG AGCCCGATAC
AAAGCGCACG TAAAAACTCT TGGCGAGCGG CTAGACGGCT ATTGCTCTCG GATTACACAC
TACGGAAGAA CATATTTGCC AGGTGGAAAA GCAACCTATA CCGGACCGGA CGATAGCGTA
AAATGA
 
Protein sequence
MNGSEMETGI SKAPKENLNG PTANASTQTA AVESKPALEL DPQPKAPDSC SNAFDKVKTP 
CSTSYGEVIY ATKEKMFYLL PERAASSIKE AMNELEQHIS VSKSPEERLK GMNTAGLLEY
FLEPKLTNFL QGEQKSRMLE IEAQEPDIAQ PTMAMRLKAV SREARNSAAL DKQPDQSEYA
RNRELANQQQ ASLLEANSDG QKLQRLYSEW KKLKNIAVAQ AKVAGYTYES GNLFSPGALE
ARSRVQTYLK ARSALTSSGK LTTLKEEDFQ KNKKAYLDAT NCVIDGKARM CGYLKEVANE
RKKVEKDFAA YIDSILKVAD YGLALPEFAL IPDTGDISAG IEKFKAYLEM EQQQIKLTEQ
IRSKYKAWID ASGQNVAAPT GIVEAEQAEW QRIQQARLKL REDAEAAVAA ALPLRHLLWE
PEQFQPKPEE RLVKAGFPLR EVALFNSPNS PVKHLSLLNL EGITKVLKKD ASEIGAAASK
DLQKLPGNSN GKAESDSDDN PFHEWLREQG ALAIKDQQSD WFDEKGWFDV EMFHSYLKSK
NYKVETFEDA GARKDWGLRL RQLLFKEEVR SSLRLFDNSP QAQLVRCLTP PQSSIHTATK
VSGPSFSVAD NFKASAKAEA SLGIDLARGE VELMKMDLPG RDQAKDILVP YLDYEKNRKN
LNLGRFSIHL GARAWGYTGA TLLLSSSVQL GRANVQGGLN LPEITDAKRA DTTNATAATA
RSEPVLEGDA AKVRVEDGAK AQFNLFAGVQ AGILLTGALN WAPPKDIAAL RAAPTPGMSN
SVNSTKASQW SSLARLTAGF TAAYGLGANA DIGISLHEGR FIMRFKASLI VGTGAGGEFQ
FEVGYDGVTD LINLLRREMH KNQDKSLIFV TDDAADYIDK LNFLGAAGME VAMSYMQGVD
MVMSLYEALT GGGRGGTVAH TIMTYRNQAE LEEWFIAATP GALGPMLMTL TSAAEAFKIP
LKLSDSSQAS EYSHDQAHLL QQKAIERILG WILKRAEKDG TISKAKSQFE EACMCMNRFG
TKEQNQNQKY CENRLHMDNF MSEAVMRLQD RTSDDTRARY KAHVKTLGER LDGYCSRITH
YGRTYLPGGK ATYTGPDDSV K