Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2547 |
Symbol | |
ID | 3714090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2915404 |
End bp | 2917482 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 4-alpha-glucanotransferase |
Protein accession | YP_348278 |
Protein GI | 77458772 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATG CGCAACTGGA AATTCTCGCC AGCCGAGCCG GCCTTGCCGT CGACTGGATC GACGCCAACG GGCGAGCGCA AAAAGTCGCC CCGGCGGTGC TGCGCAATGT GCTGATCGGC CTCGGTCACC CGGCCGGAAC GGCTCAGGAA ATCGACGCCA GCCTGCTTGA ACTGCAACAG GTACAGGAAA ATCGCCATCT ACCGCCACTG CTCACTGCCG ATGTTGGCGT GGGCGTGGAC CTGGCCCGTT ATTTCGAACC CGAGACCCCT TGCGAGATTC ACCTGGAAGA CGGCTCGCGC CTGAGTCTCA AGCTGGATGC CGAGGCCGTG TTGCCCGGCG AAATTCCGGT CGGCTATCAG CAAGTGCACA TCGCCGATCA GCAATTCACC CTGGCCGTGG CACCGGAACG CTGCTTCAGC GTGGGTGACG CGGTGGACAG CCCGATCCCA CGCGCGTGGG GCCTGAGCGT GCAGCTTTAT GGCCTGCGCC GCCCCGGCGA TGGCGGTTTC GGCGACACCC AGGCCTTGGA AGAACTGGCC CGTGTGGCCG GTGAGCGCGG GGCCGATGCC TTGGCGATCA GCCCGCTGCA CGCGATGTTC AGCGCCGACA CCGGGCGCTA CAGCCCCTAC TCGCCGTCCA GTCGGCTGTT TCTCAATCCG CTGTATGCCG CACCCGGCGC GATCCTCGGC GAGCGCGCCC TGCGCGATGC GATTGACGCG GCCGGGCTGA CCGAGCAGTT CGAGCAACTG CAAAACCTGA AACTGATCGA CTGGCCGAAA GCGGCCGAGG CCAAACTGAA ACTGCTGCAA GCCTTGTACG ACGGCTTCAT CAGCGGCGAA CACCCGTTGC ACGCCGACTT CTCCAGCTTT CGTGATGCTG GCGGCGAAGC GCTGGAAAAC CACTGCCGCT TCGAAGCTAT CCAGGAAATG CGCGCCGCCC GTGGTGAGAG CCTCGACTGG CGCCAATGGC CGGAGCACTG GCACGACCCG CGCGGCGCTG CCCTCGGCGC ATTTGCCGAG GAATACGCCG AGCGCATCAG CTACTTCGCA TTCTGCCAAT GGTTGATCCA CCGCTGCCTG GAGCGCGCCC AGACCGCCGC CCGCAGCGCC GGCATGGGTA TCGGCCTGAT CGCCGACCTG GCGGTGGGTG CCGACGGTGC CGGCAGCCAG GCCTGGAGCT TTCAGGACGA GTTGCTCGCC TCGCTGACCG TCGGCGCGCC GCCGGACATC CTCAATCGCT CAGGCCAGGG CTGGGGCATT TCCGCGTTTT CCCCGGAAGG TCTGGTGCGC AACGGCTTTC GTGCGTTCAT CGACATGCTG CGCGCCAACT TCGCCCACGC CGGCGGGCTG CGCATCGACC ATGTCATGGG CCTGCAACGG CTGTGGGTGA TTCCCAACGG CGCGGTCCCG GCGGACGGCG CCTACCTGTA TTACCCGGTG GATGACCTGT TGCGTCTGTT GACTCTCGAA TCCCATCGCC ATCAAGCGAT CGTGCTCGGC GAAGACCTCG GCACCGTGCC CGATGGCCTG CGGGAAAAAC TCATCGCCCG CGCCATGCTC GGCATGCGCG TGCTGTTGTT CGAACAGGAC AACACCTTTT TCAAACCGAT CCTCGACTGG CCGGACAACG CGCTGGCCAC CACCAGCACC CACGATCTGC CGACCCTCAA CGGTTGGTGG CATGGTCGCG ACATCGACTG GAATGCGCGA CTGGGACTGA TCGACGCCAA CGGCGAAATC GACTGGCGCC GTTACCGCGA ACGCGAGCGT GAAGGCCTGC GCAATGCCCT GAGCCAGGAC CCGCAGAACT TTCGCGAGGA ATCCCACGAG GCCGATCAGG TGGTCGACGC CGCGGTGCGT TTCCTCGGCC ACACCCGTGC GCCGTTGGTT CTGCTGCCGT TGGAAGATGC GCTGGGGCTC GACGAGCAGG CCAACCTGCC CGGCACCATC GACACCCACC CCAACTGGTC GCGCCGCTTG CCGGCCACCA GTGAGACGCT GCTCGACGGT GTCGACGCCG CAAGACGCCT GGAACTATTG GCGTGTGCCC GCCTTCAGGC AGCCGAGCGT GACCAATGA
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Protein sequence | MSDAQLEILA SRAGLAVDWI DANGRAQKVA PAVLRNVLIG LGHPAGTAQE IDASLLELQQ VQENRHLPPL LTADVGVGVD LARYFEPETP CEIHLEDGSR LSLKLDAEAV LPGEIPVGYQ QVHIADQQFT LAVAPERCFS VGDAVDSPIP RAWGLSVQLY GLRRPGDGGF GDTQALEELA RVAGERGADA LAISPLHAMF SADTGRYSPY SPSSRLFLNP LYAAPGAILG ERALRDAIDA AGLTEQFEQL QNLKLIDWPK AAEAKLKLLQ ALYDGFISGE HPLHADFSSF RDAGGEALEN HCRFEAIQEM RAARGESLDW RQWPEHWHDP RGAALGAFAE EYAERISYFA FCQWLIHRCL ERAQTAARSA GMGIGLIADL AVGADGAGSQ AWSFQDELLA SLTVGAPPDI LNRSGQGWGI SAFSPEGLVR NGFRAFIDML RANFAHAGGL RIDHVMGLQR LWVIPNGAVP ADGAYLYYPV DDLLRLLTLE SHRHQAIVLG EDLGTVPDGL REKLIARAML GMRVLLFEQD NTFFKPILDW PDNALATTST HDLPTLNGWW HGRDIDWNAR LGLIDANGEI DWRRYRERER EGLRNALSQD PQNFREESHE ADQVVDAAVR FLGHTRAPLV LLPLEDALGL DEQANLPGTI DTHPNWSRRL PATSETLLDG VDAARRLELL ACARLQAAER DQ
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