Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2536 |
Symbol | |
ID | 3712109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2901379 |
End bp | 2903610 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | glycogen branching enzyme |
Protein accession | YP_348267 |
Protein GI | 77458761 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.507075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTCT CGAACAGGGA ACAGGGTCAC GCTAAAGAAA GATTGCTGCC CACTGCAAAA GACATTGATG CTTTAGTGCG CGCAGAACAC CACGACCCGT TTTCCATTCT TGGCCCCCAC GGCGATGGTG CCGGCGGGCA ATTTATCCGG GCGTATCTGC CCGGCGCATT GAGTGTTTCT GTCGTCGATA AAAACAGTGG CGAAGAGCTC GGTCCGCTGG AGGCCACCGA AACGCCGGGG CTGTTTGTCG GGCATTTCGA AGGCTCACGG CCGTACCTGT TGCGCACCCG CTGGGCCGGT GGTGAACAGG TCGCGGAAGA TCCTTACAGC TTTGGTCAGT TGCTCGGTGA AATGGATTTG TATCTGTTCG CCGAAGGCAA CCATCGCGAT CTCAGCAGTT GCCTTGGCGC GCAGCTGAAA ACCGTCGATG GCGTCGACGG TGTGCGCTTT GCCGTGTGGG CACCGAATGC CCGGCGGGTG TCGGTGGTCG GCGATTTCAA CGTCTGGGAC GGGCGGCGGC ATCCGATGCG CTTGCGGCAT CCATCCGGGG TCTGGGAGCT GTTCATTCCA CGCTTGCAGG CGGGCGAGCT GTACAAATAC GAAATCCTCG GCGCCCACGG CATCCTCCCG CTCAAAGCCG ACCCGATGGC GCTGGCCACC AGCCTGCCGC CGGACACGGC CTCGAAAGTC GCCTCGCCGT TGCAGATCGA CTGGCAGGAT CAGGACTGGA TGAGCGGCCG TCGCGAACGC CAGCAACACA ACGCGCCGTT GTCGATCTAT GAATTGCACG CCGGATCCTG GCAATGCGAA CTCGACGATC TGGGCGAAGT GGCGCGCCAG TACACCTGGC CGGAGCTCGC CGAGCGGCTG ATTCCCTACG TGAAGGAACT GGGTTTCACC CACATCGAAC TGATGCCGAT CATGGAGCAC CCGTTCGGCG GTTCATGGGG CTATCAGTTG CTGTCGCAGT TCGCTCCGAG TGCGCGATAC GGCACACCCG AGCAGTTCGG CGAGTTCGTC AATGCCTGTC ACCAGGCCGG CATCGGTGTG ATTCTCGACT GGGTGCCGGC GCATTTCCCG ACCGATACCC ATGGCCTTGC GCAATTCGAC GGCACCGCGC TCTACGAATA CGGTAATCCA CTGGAAGGCT TCCACCAGGA TTGGGACACG CTGATCTACA ACCTGGGCCG CACCGAAGTG CACGGCTACA TGCTGGCGTC GGCGTTGCAC TGGCTCAAGC ATTTCCATAT CGACGGGCTG CGGGTCGATG CGGTGGCGTC GATGCTCTAT CGTGATTATT CGCGCAAGGC CGGCGAGTGG GTGCCGAACC GTCATGGCGG TCGCGAGAAC CTGGAAGCCA TCGATTTCCT GCGGCACTTG AACGACGTGG TGGCACTGGA AGCACCGGGC GCACTGGTGA TTGCCGAGGA GTCCACGGCG TGGCCGGGCG TCAGCCAGAG CACCCAACAG GGCGGTCTCG GTTTCGCCTA CAAATGGAAC ATGGGCTGGA TGCACGACTC GCTGCACTAC ATTCAGCAGG ATCCGGTGTA CCGCGCCCAT CACCACAACG AGTTGAGTTT CGGCCTGGTC TACGCCTGGT CCGAGCGCTT CATCCTGCCG ATTTCCCACG ACGAAGTGGT GCACGGCAAG CATTCGCTGA TCGACAAGAT GCCTGGCGAT CGCTGGCAGA AATTTGCCAA CCTGCGGGCT TACCTGAGTT TCATGTGGAC CCATCCGGGC AAGAAGCTGT TGTTCATGGG TTGCGAGTTC GGCCAGTGGC GCGAGTGGAA TCATGATCAG CAGCTGGACT GGTATCTGCT GCAATATTCG GAACACAAAG GCGTGCAGAA ACTGGTCAGC GACCTCAATC GGTTGTACCG CGAAGAGCCG GCGCTGCATG AGCAGGACGA TGCGCCGCAA GGGTTTCAGT GGTTGATCGG CGACGATGCG ATCAACAGCG TCTATGCGTG GCTGCGCTGG AGCAAGGACG GCACGCCAGT GCTGGTGGTG GCCAACTTCA CCCCGGTGCC GCGTCAGTCT TACCGCGTGG GCGTGCCGTT TGCCGGGCGC TGGAAGGAGT TGCTCAACAG TGACGCCGAC ACGTATGCCG GTTCCAATTA TGGCAACGGG GGCGGGGCGT TCACCGAAGA GGTGGCCAGC CATGGCCAGG CGTTGTCGCT GGAGCTGAAC CTGCCGCCGC TGGCGGTGTT GATCCTCAAA CCCGAAGTCT GA
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Protein sequence | MSFSNREQGH AKERLLPTAK DIDALVRAEH HDPFSILGPH GDGAGGQFIR AYLPGALSVS VVDKNSGEEL GPLEATETPG LFVGHFEGSR PYLLRTRWAG GEQVAEDPYS FGQLLGEMDL YLFAEGNHRD LSSCLGAQLK TVDGVDGVRF AVWAPNARRV SVVGDFNVWD GRRHPMRLRH PSGVWELFIP RLQAGELYKY EILGAHGILP LKADPMALAT SLPPDTASKV ASPLQIDWQD QDWMSGRRER QQHNAPLSIY ELHAGSWQCE LDDLGEVARQ YTWPELAERL IPYVKELGFT HIELMPIMEH PFGGSWGYQL LSQFAPSARY GTPEQFGEFV NACHQAGIGV ILDWVPAHFP TDTHGLAQFD GTALYEYGNP LEGFHQDWDT LIYNLGRTEV HGYMLASALH WLKHFHIDGL RVDAVASMLY RDYSRKAGEW VPNRHGGREN LEAIDFLRHL NDVVALEAPG ALVIAEESTA WPGVSQSTQQ GGLGFAYKWN MGWMHDSLHY IQQDPVYRAH HHNELSFGLV YAWSERFILP ISHDEVVHGK HSLIDKMPGD RWQKFANLRA YLSFMWTHPG KKLLFMGCEF GQWREWNHDQ QLDWYLLQYS EHKGVQKLVS DLNRLYREEP ALHEQDDAPQ GFQWLIGDDA INSVYAWLRW SKDGTPVLVV ANFTPVPRQS YRVGVPFAGR WKELLNSDAD TYAGSNYGNG GGAFTEEVAS HGQALSLELN LPPLAVLILK PEV
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