Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2520 |
Symbol | |
ID | 3712093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2877369 |
End bp | 2877869 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | thiol peroxidase (atypical 2-Cys peroxiredoxin) |
Protein accession | YP_348251 |
Protein GI | 77458745 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0980441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAAG TCACGCTCAA AGGCAACCCG GTTCAAGTCA ACGGCCAACT GCCACAAGCC GGTTCCAAGG CGCCAGCCTT TTCCCTGGTA GCCGGCAATC TGTCCGACGT CACCCTGAAA GACTTCGCCG GCAAGCGCAA AGTGCTGAAC ATCTTCCCAA GCGTCGACAC CCCGACCTGC GCCACTTCCG TGCGCAAGTT CAACGCCCAG GCCAACGACA TCAGCAACAC CGTGGTGCTG TGCATCTCGG CTGACCTGCC GTTCGCCCAG GCTCGCTTCT GCGGCGCCGA AGGCCTGGAA AACGTACAAA ACCTGTCGAC CCTGCGCGGC ACCGAGTTCC TCGAGAACTA CGGCGTGGCC ATCGCTGACG GCCCGCTGAA AGGCCTGACC GCCCGTGCGG TGGTTGTTCT GGACGAAAAC GACAACGTCC TGCACAGCGA ACTGGTCAAG GAAATTGCAG AAGAGCCTAA CTACGAAGCG GCACTGTCCG TTCTGAAATA A
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Protein sequence | MAQVTLKGNP VQVNGQLPQA GSKAPAFSLV AGNLSDVTLK DFAGKRKVLN IFPSVDTPTC ATSVRKFNAQ ANDISNTVVL CISADLPFAQ ARFCGAEGLE NVQNLSTLRG TEFLENYGVA IADGPLKGLT ARAVVVLDEN DNVLHSELVK EIAEEPNYEA ALSVLK
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