Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2381 |
Symbol | |
ID | 3715472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2740339 |
End bp | 2741070 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348113 |
Protein GI | 77458608 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00190357 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGATTGCGT CGTCGATCTT CATCGGTTGC GCCGGCTGGA GCCTGCCCCG CGAATACTGG CCGGACTTCC CGGAGCAGGG CACTCACCTG CAACGCTATG CCGCGCTGCT CAATGGTGTG GAAATCAACA GCTCCTTTTA CCGTCCGCAC AAGCTGCAAA CCTATGCCCG ATGGGCCGAG TCGGTGGCGG ACGGATTTCG CTTCTGCGTG AAGATGCCAA AGTCGATCAG CCATGAGCGA CGCCTGCGGG ACTGCGAATC TGAGCTCGAT GCCTTTCTCA AGCAGTGTTC GGGGCTGGGT GATCATCTGG GTTGCCTGCT GCTGCAGTTG CCGCCGTCGC TGACGTTTGA CGAAGCGGTT GCCGAGGCGT TTTTTATCGG CTTGCGCGAG CGTTATTCCG GGGCCGTCGT GCTGGAACCG CGCCACGCAT CCTGGGCCGC CGCCGAACTG TTGTTGATGG CGTATCGCAT CGCGCAAGCG GTGGTCGATC CCTCGCGTAT CAGCACCGAT GCGGCACCGT GCGGCTGGCG GGGCGTGCGT TATTGGCGGC TGCACGGTTC GCCACGGATT TATCACAGCC CCTATGATTC GGCGTATCTG GAAACGCTCG CCGGCGATTT GCAGGTGGCG GCTGTCGATG GCATCGACAC CTGGTGCATT TTCGACAACA CCGCCAGCGG CGCGGCACTC GGCAATGCGC TGGAGCTGCG GCGGGTACTG GCGCAGGGCT GA
|
Protein sequence | MIASSIFIGC AGWSLPREYW PDFPEQGTHL QRYAALLNGV EINSSFYRPH KLQTYARWAE SVADGFRFCV KMPKSISHER RLRDCESELD AFLKQCSGLG DHLGCLLLQL PPSLTFDEAV AEAFFIGLRE RYSGAVVLEP RHASWAAAEL LLMAYRIAQA VVDPSRISTD AAPCGWRGVR YWRLHGSPRI YHSPYDSAYL ETLAGDLQVA AVDGIDTWCI FDNTASGAAL GNALELRRVL AQG
|
| |