Gene Pfl01_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2215 
Symbol 
ID3715717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2535908 
End bp2537863 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347947 
Protein GI77458442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000167589 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CTCTGCTGCA ACTGACCGGC ATCAGCCGCA GTTTCACTGC CGGCGACCGT 
GAATTTCTGG CGCTGAAGAA TATCGACCTG ACGATCCATG CCGGGGAAAT GGTCGCGATC
ATCGGCGCCT CGGGCTCCGG CAAATCGACC CTGATGAACA TCCTCGGCTG CCTCGATTAC
GCCACCGCCG GCAGCTACAG GATCAACGGT CGGGAAACCC GTGATCTGGA CAATCAGGCG
CTGGCGGAAC TGCGTCGCGA CTATTTCGGC TTTATCTTTC AGCGCTACCA CTTGCTGCCG
CACTTGAGCG CGGTGCACAA CGTCGAGATG CCGGCGATCT ACGCCGGCAC GCCGGAACCA
CAGCGTCATG CCCGGGCCCG TGAATTGTTG GCGCGCCTTG GGCTGGAAGG GCACCTGACG
CACCGCCCGA GCCAGCTATC GGGCGGTCAG CAGCAGCGGG TCAGTATCGC CCGTGCGCTG
ATGAACGGCG GGGAAGTGAT CCTCGCGGAT GAGCCCACCG GCGCCCTCGA TACCACCAGC
GGCAAGGAGG TGATGCGCAT CCTGCTGGAG CTGCACGCGG CCGGGCACAC GGTGATTCTG
GTGACTCACG ACCCCAAGGT CGCGGCCAAC GCCGAGCGCA TCATCGAAGT CAGCGACGGC
GAAATCCTCA GCGACCGCCG CAACGAGCGC GACACCGCGG CATTGAGCAA TGAGGACGCG
GTGCCCAAAT CCACGGCAGC GCGGCGTCTG GTGGCCAGCC TCGGGTTGTT CAAGGAAGCC
TTCAACATGG CCTGGGTCGC GCTGATTTCC CATCGGATGC GTACCTTGCT GACCATGCTC
GGGATCGTCA TCGGCATCAC TTCGGTGGTG TCGATCTCGG CCATCGGCGA AGGGGCCAAG
CGCTATGTGC TGAAGGACAT CCAGGCCATC GGCAGCAACA CCATCGATAT CTACTCCGGC
ACCAGTTTCG GCGACAGCCG CTCGGCGGCC ATCGAAACCC TGGTGCCGGC GGATGTGACG
GCGCTCAACC AGCTGTACTA CGTCGACAGC GCCACGCCGG TGGTCGGGCG CAATCTGTTG
CTGCGCTATC GCAATATCGA CCTCGATGCG CAGGTCAACG GCGTCAGCGA TCTGTACTTC
CAGGTGCGCG GAATCAAGAT GGAGTCGGGC ATCCCGTTCA GCGAAAGCGA TGCCCGGCGC
CAGGCTCAGG TGGTGGTGAT CGATCACAAC ACCCGCCATC GGTTGTTCGG CGAGGGCGTC
GATCCGTTGG GGCAGGTGAT CCTGATCGGC AACCTGCCGT GCACCGTGAT CGGTGTGGCG
GCGGAGAACA AGAACATCTT CTCCTCGAGC AAGTCTTTGA ATGTCTGGGT GCCTTATGAA
ACCGCGGCCG GGCGGCTATT GGGACAGCGT TATCTGGACA GCATCAGTGT GCGGATCAAG
GACGGCCAGC CGAGCAAAGT GGTGGAAGAC AACGTCAACA AACTGATGCT GCAGCGTCAC
GGCACCAAGG ATTTCTTTAC CAACAACCTC GACAGCGTGA TGCAGACCGT GCAGAAAACC
AGCCGCTCGC TGGCACTGTT GTTATCGCTG ATTGCGGTGA TTTCTCTGGT GGTCGGGGGC
ATCGGGGTGA TGAACATCAT GCTGGTGTCG GTCACCGAGC GTACTCGTGA AATCGGTATC
CGCATGGCGG TGGGGGCGCG GCAGTCGGAC ATCCGTCAGC AGTTTCTGGT GGAGGCGGTG
ATGGTCTGTC TGCTCGGTGG GGCCATCGGT ATTTCGCTGA GTTACGCCAT CGGCCATTTG
TTCTCGTTGT TCATCAAGGA GTGGGAAATG GTGTTCTCGC TGACCTCGGT GCTCACGGCG
GTGATCTGCT CGACGCTGAT CGGCATCGTG TTCGGCTTTG TGCCGGCACG CAATGCGTCG
CGGCTCGACC CGATCGAGGC GTTGGCGCGG GACTGA
 
Protein sequence
MSEPLLQLTG ISRSFTAGDR EFLALKNIDL TIHAGEMVAI IGASGSGKST LMNILGCLDY 
ATAGSYRING RETRDLDNQA LAELRRDYFG FIFQRYHLLP HLSAVHNVEM PAIYAGTPEP
QRHARARELL ARLGLEGHLT HRPSQLSGGQ QQRVSIARAL MNGGEVILAD EPTGALDTTS
GKEVMRILLE LHAAGHTVIL VTHDPKVAAN AERIIEVSDG EILSDRRNER DTAALSNEDA
VPKSTAARRL VASLGLFKEA FNMAWVALIS HRMRTLLTML GIVIGITSVV SISAIGEGAK
RYVLKDIQAI GSNTIDIYSG TSFGDSRSAA IETLVPADVT ALNQLYYVDS ATPVVGRNLL
LRYRNIDLDA QVNGVSDLYF QVRGIKMESG IPFSESDARR QAQVVVIDHN TRHRLFGEGV
DPLGQVILIG NLPCTVIGVA AENKNIFSSS KSLNVWVPYE TAAGRLLGQR YLDSISVRIK
DGQPSKVVED NVNKLMLQRH GTKDFFTNNL DSVMQTVQKT SRSLALLLSL IAVISLVVGG
IGVMNIMLVS VTERTREIGI RMAVGARQSD IRQQFLVEAV MVCLLGGAIG ISLSYAIGHL
FSLFIKEWEM VFSLTSVLTA VICSTLIGIV FGFVPARNAS RLDPIEALAR D